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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789007   nuclear pore complex protein NUP1 
 gma-r.7   100789007   nuclear pore complex protein NUP1 
 gma-u.5   100789027   nuclear pore complex protein NUP1 
 mtr-u.5   25487141   nuclear pore complex protein NUP1 
 mtr-u.5   25497956   nuclear pore complex protein NUP1 
 ppo-u.5   7459889   nuclear pore complex protein NUP1 
 ath-u.5   AT5G20200   nucleoporin-like protein 
 bra-r.6   103851334   nuclear pore complex protein NUP1 
 bra-r.6   103845700   nuclear pore complex protein NUP1 
 vvi-u.5   100261107   nuclear pore complex protein NUP1 
 ghi-r.1   121203185   uncharacterized LOC121203185 
 ghi-r.1   107962608   nuclear pore complex protein NUP1 
 ghi-r.1   107907329   uncharacterized LOC107907329 
 bna-r.1   125579229   nuclear pore complex protein NUP1-like 
 bna-r.1   106439485   nuclear pore complex protein NUP1 
 bna-r.1   106380711   uncharacterized LOC106380711 
 cit-r.1   102610889   hypothetical protein 
 sly-u.5   101247836   nuclear pore complex protein NUP1 
 sot-r.1   102606239   nuclear pore complex protein NUP1 
 nta-r.1   107762631   uncharacterized LOC107762631 
 nta-r.1   107771845   uncharacterized LOC107771845 
 osa-u.5   4341480   nuclear pore complex protein NUP1 
 zma-u.5   100278385   uncharacterized LOC100278385 
 tae-r.2   123148208   uncharacterized LOC123148208 
 tae-r.2   123165500   uncharacterized LOC123165500 
 tae-r.2   123157198   uncharacterized LOC123157198 
 hvu-r.1   123408720   uncharacterized LOC123408720 
 sbi-r.1   8065080   uncharacterized LOC8065080 
 bdi-r.1   100837239   uncharacterized LOC100837239 

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Top 50 coexpressed genes to 100789007 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789007 (gma-u.5 coexpression data)

CoexMap"100789007"


gmaLOC100789007 | Entrez gene ID : 100789007      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 2 1 3 3 1 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071763 [list] [network] nuclear membrane organization  (12 genes)  IEA  
GO CC
GO:0005635 [list] [network] nuclear envelope  (102 genes)  IEA  
GO MF
Protein XP_006578449.1 [sequence] [blastp]
XP_014630168.1 [sequence] [blastp]
XP_014630169.1 [sequence] [blastp]
XP_040871048.1 [sequence] [blastp]
XP_040871049.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_006578449.1)
nucl 9  (predict for XP_014630168.1)
nucl 9,  cyto 1  (predict for XP_014630169.1)
nucl 9  (predict for XP_040871048.1)
nucl 9  (predict for XP_040871049.1)
Subcellular
localization
TargetP
other 7,  chlo 6  (predict for XP_006578449.1)
other 9  (predict for XP_014630168.1)
other 7,  chlo 7  (predict for XP_014630169.1)
other 9  (predict for XP_040871048.1)
other 9  (predict for XP_040871049.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789007
gma-r.7
for
100789007
gma-u.5
for
100789027
mtr-u.5
for
25487141
mtr-u.5
for
25497956
ppo-u.5
for
7459889
ath-u.5
for
AT5G20200
bra-r.6
for
103851334
bra-r.6
for
103845700
vvi-u.5
for
100261107
ghi-r.1
for
121203185
ghi-r.1
for
107962608
ghi-r.1
for
107907329
bna-r.1
for
125579229
bna-r.1
for
106439485
bna-r.1
for
106380711
cit-r.1
for
102610889
sly-u.5
for
101247836
sot-r.1
for
102606239
nta-r.1
for
107762631
nta-r.1
for
107771845
osa-u.5
for
4341480
zma-u.5
for
100278385
tae-r.2
for
123148208
tae-r.2
for
123165500
tae-r.2
for
123157198
hvu-r.1
for
123408720
sbi-r.1
for
8065080
bdi-r.1
for
100837239


Ortholog ID: 7343
Species gma gma mtr mtr ppo ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100789007 LOC100789027 LOC25487141 LOC25497956 LOC7459889 AT5G20200 LOC103851334 LOC103845700 LOC100261107 LOC107962608 LOC107907329 LOC107901305 LOC106439485 LOC106380711 LOC106380709 LOC102610889 LOC101247836 LOC102606239 LOC107762631 LOC107771845 LOC4341480 LOC100278385 LOC123148208 LOC123165500 LOC123157198 LOC123408720 LOC8065080 LOC100837239
Function* nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nucleoporin-like protein nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC107907329 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC106380711 nuclear pore complex protein NUP1 hypothetical protein nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC107762631 uncharacterized LOC107771845 nuclear pore complex protein NUP1 uncharacterized LOC100278385 uncharacterized LOC123148208 uncharacterized LOC123165500 uncharacterized LOC123157198 uncharacterized LOC123408720 uncharacterized LOC8065080 uncharacterized LOC100837239
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr00564 Glycerophospholipid metabolism 2
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 8
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789007 100789027 25487141 25497956 7459889 832143 103851334 103845700 100261107 107962608 107907329 107901305 106439485 106380711 106380709 102610889 101247836 102606239 107762631 107771845 4341480 100278385 123148208 123165500 123157198 123408720 8065080 100837239
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