Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT5G20200   nucleoporin-like protein 
 ath-r.7   AT5G20200   nucleoporin-like protein 
 ath-m.9   AT5G20200   nucleoporin-like protein 
 ath-e.2   AT5G20200   nucleoporin-like protein 
 ath-m.4.bio   AT5G20200   nucleoporin-like protein 
 ath-m.4.hor   AT5G20200   nucleoporin-like protein 
 ath-m.4.lig   AT5G20200   nucleoporin-like protein 
 ath-m.4.str   AT5G20200   nucleoporin-like protein 
 ath-m.4.tis   AT5G20200   nucleoporin-like protein 
 bra-r.6   103851334   nuclear pore complex protein NUP1 
 bra-r.6   103845700   nuclear pore complex protein NUP1 
 bna-r.1   125579229   nuclear pore complex protein NUP1-like 
 bna-r.1   106439485   nuclear pore complex protein NUP1 
 bna-r.1   106380711   uncharacterized LOC106380711 
 ghi-r.1   121203185   uncharacterized LOC121203185 
 ghi-r.1   107962608   nuclear pore complex protein NUP1 
 ghi-r.1   107907329   uncharacterized LOC107907329 
 cit-r.1   102610889   hypothetical protein 
 gma-u.5   100789027   nuclear pore complex protein NUP1 
 gma-u.5   100789007   nuclear pore complex protein NUP1 
 vvi-u.5   100261107   nuclear pore complex protein NUP1 
 ppo-u.5   7459889   nuclear pore complex protein NUP1 
 mtr-u.5   25497956   nuclear pore complex protein NUP1 
 mtr-u.5   25487141   nuclear pore complex protein NUP1 
 sly-u.5   101247836   nuclear pore complex protein NUP1 
 sot-r.1   102606239   nuclear pore complex protein NUP1 
 nta-r.1   107762631   uncharacterized LOC107762631 
 nta-r.1   107771845   uncharacterized LOC107771845 
 osa-u.5   4341480   nuclear pore complex protein NUP1 
 zma-u.5   100278385   uncharacterized LOC100278385 
 tae-r.2   123148208   uncharacterized LOC123148208 
 tae-r.2   123157198   uncharacterized LOC123157198 
 tae-r.2   123165500   uncharacterized LOC123165500 
 hvu-r.1   123408720   uncharacterized LOC123408720 
 sbi-r.1   8065080   uncharacterized LOC8065080 
 bdi-r.1   100837239   uncharacterized LOC100837239 

close


Top 50 coexpressed genes to AT5G20200 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G20200 (ath-u.5 coexpression data)

CoexMap"832143"


athAT5G20200 | Entrez gene ID : 832143      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 1 2 1 1 2 1 1 2 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005635 [list] [network] nuclear envelope  (107 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_197520.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for NP_197520.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_197520.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT5G20200
ath-r.7
for
AT5G20200
ath-m.9
for
AT5G20200
ath-e.2
for
AT5G20200
ath-m.4.bio
for
AT5G20200
ath-m.4.hor
for
AT5G20200
ath-m.4.lig
for
AT5G20200
ath-m.4.str
for
AT5G20200
ath-m.4.tis
for
AT5G20200
bra-r.6
for
103851334
bra-r.6
for
103845700
bna-r.1
for
125579229
bna-r.1
for
106439485
bna-r.1
for
106380711
ghi-r.1
for
121203185
ghi-r.1
for
107962608
ghi-r.1
for
107907329
cit-r.1
for
102610889
gma-u.5
for
100789027
gma-u.5
for
100789007
vvi-u.5
for
100261107
ppo-u.5
for
7459889
mtr-u.5
for
25497956
mtr-u.5
for
25487141
sly-u.5
for
101247836
sot-r.1
for
102606239
nta-r.1
for
107762631
nta-r.1
for
107771845
osa-u.5
for
4341480
zma-u.5
for
100278385
tae-r.2
for
123148208
tae-r.2
for
123157198
tae-r.2
for
123165500
hvu-r.1
for
123408720
sbi-r.1
for
8065080
bdi-r.1
for
100837239


Ortholog ID: 7343
Species ath bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT5G20200 LOC103851334 LOC103845700 LOC106439485 LOC106380711 LOC106380709 LOC107962608 LOC107907329 LOC107901305 LOC102610889 LOC100789027 LOC100789007 LOC100261107 LOC7459889 LOC25497956 LOC25487141 LOC101247836 LOC102606239 LOC107762631 LOC107771845 LOC4341480 LOC100278385 LOC123148208 LOC123157198 LOC123165500 LOC123408720 LOC8065080 LOC100837239
Function* nucleoporin-like protein nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC106380711 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC107907329 nuclear pore complex protein NUP1 hypothetical protein nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 nuclear pore complex protein NUP1 uncharacterized LOC107762631 uncharacterized LOC107771845 nuclear pore complex protein NUP1 uncharacterized LOC100278385 uncharacterized LOC123148208 uncharacterized LOC123157198 uncharacterized LOC123165500 uncharacterized LOC123408720 uncharacterized LOC8065080 uncharacterized LOC100837239
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 5
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
ppo04136 Autophagy - other 2
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr00564 Glycerophospholipid metabolism 2
mtr00240 Pyrimidine metabolism 2
mtr00670 One carbon pool by folate 2
mtr00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 8
nta00860 Porphyrin metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832143 103851334 103845700 106439485 106380711 106380709 107962608 107907329 107901305 102610889 100789027 100789007 100261107 7459889 25497956 25487141 101247836 102606239 107762631 107771845 4341480 100278385 123148208 123157198 123165500 123408720 8065080 100837239
The preparation time of this page was 0.1 [sec].