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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789620   RING-H2 finger protein ATL8 
 gma-r.7   100789620   RING-H2 finger protein ATL8 
 gma-m.5   100789620   RING-H2 finger protein ATL8 
 gma-u.5   100813341   RING-H2 finger protein ATL8 
 gma-u.5   100786769   RING-H2 finger protein ATL8 
 gma-u.5   100787383   RING-H2 finger protein ATL8 
 mtr-u.5   11405802   RING-H2 finger protein ATL8 
 mtr-u.5   11428288   RING-H2 finger protein ATL8 
 mtr-u.5   11411600   RING-H2 finger protein ATL80 
 ppo-u.5   7471753   RING-H2 finger protein ATL8 
 ppo-u.5   7492116   RING-H2 finger protein ATL8 
 ath-u.5   RHA3A   RING-H2 finger A3A 
 ath-u.5   ATL8   RING/U-box superfamily protein 
 bra-r.6   103874124   probable E3 ubiquitin-protein ligase ATL44 
 bra-r.6   103872868   RING-H2 finger protein ATL80 
 bra-r.6   103853025   RING-H2 finger protein ATL8 
 vvi-u.5   100260977   RING-H2 finger protein ATL80 
 vvi-u.5   100266753   RING-H2 finger protein ATL8 
 ghi-r.1   107917879   RING-H2 finger protein ATL80 
 ghi-r.1   107922003   RING-H2 finger protein ATL80 
 bna-r.1   106394440   probable E3 ubiquitin-protein ligase ATL44 
 bna-r.1   106361280   probable E3 ubiquitin-protein ligase ATL45 
 cit-r.1   102610566   RING-H2 finger protein ATL80 
 sly-u.5   101254466   RING-H2 finger protein ATL80 
 sly-u.5   101264584   RING-H2 finger protein ATL8-like 
 sly-u.5   101265820   RING-H2 finger protein ATL80 
 sot-r.1   102600767   RING-H2 finger protein ATL8-like 
 sot-r.1   102579592   RING-H2 finger protein ATL80 
 nta-r.1   107828572   RING-H2 finger protein ATL80 
 nta-r.1   107820728   RING-H2 finger protein ATL80-like 
 nta-r.1   107807258   RING-H2 finger protein ATL8 
 osa-u.5   4330352   RING-H2 finger protein ATL80 
 osa-u.5   4336787   probable E3 ubiquitin-protein ligase ATL44 
 osa-u.5   4347807   probable E3 ubiquitin-protein ligase ATL44 
 zma-u.5   100283712   RING-H2 finger protein ATL1R 
 zma-u.5   100284205   uncharacterized LOC100284205 
 tae-r.2   123042069   RING-H2 finger protein ATL74 
 hvu-r.1   123413267   probable E3 ubiquitin-protein ligase ATL44 
 hvu-r.1   123402337   RING-H2 finger protein ATL80-like 
 sbi-r.1   8066387   probable E3 ubiquitin-protein ligase ATL45 
 sbi-r.1   8060446   RING-H2 finger protein ATL74 
 sbi-r.1   8066454   probable E3 ubiquitin-protein ligase ATL44 
 bdi-r.1   100822098   probable E3 ubiquitin-protein ligase ATL44 
 bdi-r.1   100830458   RING-H2 finger protein ATL8 

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Top 50 coexpressed genes to 100789620 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789620 (gma-u.5 coexpression data)

CoexMap"100789620"


gmaLOC100789620 | Entrez gene ID : 100789620      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 2 2 3 2 2 2 1 3 2 3 3 2 1 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_003517122.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  E.R. 2,  mito 1,  E.R._vacu 1  (predict for XP_003517122.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003517122.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789620
gma-r.7
for
100789620
gma-m.5
for
100789620
gma-u.5
for
100813341
gma-u.5
for
100786769
gma-u.5
for
100787383
mtr-u.5
for
11405802
mtr-u.5
for
11428288
mtr-u.5
for
11411600
ppo-u.5
for
7471753
ppo-u.5
for
7492116
ath-u.5
for
RHA3A
ath-u.5
for
ATL8
bra-r.6
for
103874124
bra-r.6
for
103872868
bra-r.6
for
103853025
vvi-u.5
for
100260977
vvi-u.5
for
100266753
ghi-r.1
for
107917879
ghi-r.1
for
107922003
bna-r.1
for
106394440
bna-r.1
for
106361280
cit-r.1
for
102610566
sly-u.5
for
101254466
sly-u.5
for
101264584
sly-u.5
for
101265820
sot-r.1
for
102600767
sot-r.1
for
102579592
nta-r.1
for
107828572
nta-r.1
for
107820728
nta-r.1
for
107807258
osa-u.5
for
4330352
osa-u.5
for
4336787
osa-u.5
for
4347807
zma-u.5
for
100283712
zma-u.5
for
100284205
tae-r.2
for
123042069
hvu-r.1
for
123413267
hvu-r.1
for
123402337
sbi-r.1
for
8066387
sbi-r.1
for
8060446
sbi-r.1
for
8066454
bdi-r.1
for
100822098
bdi-r.1
for
100830458


Ortholog ID: 374
Species gma gma gma mtr mtr mtr ppo ppo ath ath ath bra bra bra vvi vvi ghi ghi bna bna cit sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC100789620 LOC100813341 LOC100786769 LOC11405802 LOC11428288 LOC11411600 LOC7471753 LOC7492116 RHA3A AT1G20823 RHA3B LOC103874124 LOC103832100 LOC103845949 LOC100260977 LOC100266753 LOC107917879 LOC107922003 LOC111210253 LOC106421305 LOC102610566 LOC101254466 LOC101265820 LOC101248283 LOC102600767 LOC102579592 LOC107828572 LOC107807258 LOC107765274 LOC4330352 LOC4336787 LOC9266473 LOC100283712 LOC100284205 LOC103641925 LOC123042069 LOC123141655 LOC123451912 LOC123451909 LOC8066387 LOC8060446 LOC8066454 LOC100822098 LOC100829815
Function* RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL8 RING-H2 finger A3A RING/U-box superfamily protein RING-H2 finger A3B probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL8 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8-like RING-H2 finger protein ATL8-like RING-H2 finger protein ATL80 RING-H2 finger protein ATL80 RING-H2 finger protein ATL8 RING-H2 finger protein ATL80-like RING-H2 finger protein ATL80 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80 RING-H2 finger protein ATL1R uncharacterized LOC100284205 RING-H2 finger protein ATL74 RING-H2 finger protein ATL74 RING-H2 finger protein ATL8 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL45 RING-H2 finger protein ATL74 probable E3 ubiquitin-protein ligase ATL44 probable E3 ubiquitin-protein ligase ATL44 RING-H2 finger protein ATL80
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00250 Alanine, aspartate and glutamate metabolism 4
gma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 2
sly00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
nta03082 ATP-dependent chromatin remodeling 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789620 100813341 100786769 11405802 11428288 11411600 7471753 7492116 816251 838674 829700 103874124 103832100 103845949 100260977 100266753 107917879 107922003 111210253 106421305 102610566 101254466 101265820 101248283 102600767 102579592 107828572 107807258 107765274 4330352 4336787 9266473 100283712 100284205 103641925 123042069 123141655 123451912 123451909 8066387 8060446 8066454 100822098 100829815
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