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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789655   transcription factor bHLH104 
 gma-r.7   100789655   transcription factor bHLH104 
 gma-u.5   100813088   transcription factor ILR3-like 
 gma-u.5   100808803   transcription factor ILR3 
 gma-u.5   100806838   transcription factor bHLH115-like 
 mtr-u.5   11419849   transcription factor bHLH104 
 mtr-u.5   11445675   transcription factor ILR3 
 mtr-u.5   11409489   transcription factor ILR3 
 ppo-u.5   7497040   transcription factor ILR3 
 ppo-u.5   18095890   transcription factor ILR3 
 ppo-u.5   18101598   transcription factor bHLH104 
 ath-u.5   bHLH34   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   bHLH104   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   ILR3   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103868591   transcription factor bHLH115 
 bra-r.6   103857030   transcription factor ILR3 
 bra-r.6   103851945   transcription factor ILR3 
 vvi-u.5   100245935   transcription factor ILR3 
 vvi-u.5   100251326   transcription factor bHLH104 
 vvi-u.5   100251621   transcription factor ILR3 
 ghi-r.1   107905957   transcription factor ILR3 
 ghi-r.1   107917918   transcription factor ILR3 
 ghi-r.1   107920326   transcription factor ILR3 
 bna-r.1   125583924   transcription factor ILR3-like 
 bna-r.1   111206483   transcription factor bHLH115 
 bna-r.1   125608914   transcription factor bHLH115-like 
 cit-r.1   127899974   transcription factor ILR3-like 
 cit-r.1   102611674   transcription factor ILR3 
 cit-r.1   102613226   transcription factor bHLH104 
 sly-u.5   101265602   transcription factor ILR3 
 sly-u.5   101247632   transcription factor ILR3 
 sly-u.5   101248331   transcription factor bHLH104 
 sot-r.1   102584960   transcription factor ILR3-like 
 sot-r.1   102584888   transcription factor ILR3-like 
 sot-r.1   102602930   transcription factor ILR3-like 
 nta-r.1   107762037   transcription factor ILR3 
 nta-r.1   107813262   transcription factor ILR3-like 
 nta-r.1   107787765   transcription factor ILR3-like 
 osa-u.5   4338978   transcription factor ILR3 
 osa-u.5   4328080   transcription factor ILR3 
 osa-u.5   4343509   transcription factor ILR3 
 zma-u.5   118476893   transcription factor ILR3 
 zma-u.5   100273838   uncharacterized LOC100273838 
 zma-u.5   100280093   uncharacterized LOC100280093 
 tae-r.2   123044620   transcription factor ILR3 
 tae-r.2   123131760   transcription factor ILR3 
 tae-r.2   123052493   transcription factor ILR3 
 hvu-r.1   123425811   transcription factor ILR3-like 
 hvu-r.1   123415167   transcription factor ILR3-like 
 hvu-r.1   123407909   transcription factor ILR3-like 
 sbi-r.1   110437025   transcription factor ILR3-like 
 sbi-r.1   110434655   transcription factor ILR3-like 
 sbi-r.1   8072534   transcription factor ILR3 
 bdi-r.1   100822537   transcription factor ILR3 
 bdi-r.1   100829413   transcription factor ILR3 
 bdi-r.1   100832841   transcription factor ILR3 
 cre-r.1   CHLRE_05g241636v5   uncharacterized protein 

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Top 50 coexpressed genes to 100789655 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789655 (gma-u.5 coexpression data)

CoexMap"100789655"


gmaLOC100789655 | Entrez gene ID : 100789655      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006879 [list] [network] intracellular iron ion homeostasis  (51 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (3122 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (2313 genes)  IEA  
Protein XP_003535811.2 [sequence] [blastp]
XP_040862189.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  extr 1  (predict for XP_003535811.2)
chlo 9  (predict for XP_040862189.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_003535811.2)
other 3  (predict for XP_040862189.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789655
gma-r.7
for
100789655
gma-u.5
for
100813088
gma-u.5
for
100808803
gma-u.5
for
100806838
mtr-u.5
for
11419849
mtr-u.5
for
11445675
mtr-u.5
for
11409489
ppo-u.5
for
7497040
ppo-u.5
for
18095890
ppo-u.5
for
18101598
ath-u.5
for
bHLH34
ath-u.5
for
bHLH104
ath-u.5
for
ILR3
bra-r.6
for
103868591
bra-r.6
for
103857030
bra-r.6
for
103851945
vvi-u.5
for
100245935
vvi-u.5
for
100251326
vvi-u.5
for
100251621
ghi-r.1
for
107905957
ghi-r.1
for
107917918
ghi-r.1
for
107920326
bna-r.1
for
125583924
bna-r.1
for
111206483
bna-r.1
for
125608914
cit-r.1
for
127899974
cit-r.1
for
102611674
cit-r.1
for
102613226
sly-u.5
for
101265602
sly-u.5
for
101247632
sly-u.5
for
101248331
sot-r.1
for
102584960
sot-r.1
for
102584888
sot-r.1
for
102602930
nta-r.1
for
107762037
nta-r.1
for
107813262
nta-r.1
for
107787765
osa-u.5
for
4338978
osa-u.5
for
4328080
osa-u.5
for
4343509
zma-u.5
for
118476893
zma-u.5
for
100273838
zma-u.5
for
100280093
tae-r.2
for
123044620
tae-r.2
for
123131760
tae-r.2
for
123052493
hvu-r.1
for
123425811
hvu-r.1
for
123415167
hvu-r.1
for
123407909
sbi-r.1
for
110437025
sbi-r.1
for
110434655
sbi-r.1
for
8072534
bdi-r.1
for
100822537
bdi-r.1
for
100829413
bdi-r.1
for
100832841
cre-r.1
for
CHLRE_05g241636v5


Ortholog ID: 595
Species gma gma gma mtr mtr mtr ppo ppo ppo ath ath ath bra bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC100813088 LOC100803143 LOC100783689 LOC11419849 LOC11445675 LOC11409489 LOC18095890 LOC7492418 LOC7470923 bHLH34 bHLH104 bHLH115 LOC103849035 LOC103828768 LOC103844925 LOC100245935 LOC100258884 LOC100264856 LOC107917918 LOC107939864 LOC107942996 LOC106449668 LOC106346014 LOC106390538 LOC127899974 LOC102611674 LOC102623026 LOC101247632 LOC101248331 LOC101259956 LOC102584960 LOC102584888 LOC102603905 LOC107762037 LOC107816467 LOC107780376 LOC4338978 LOC4328080 LOC4344627 LOC118476893 LOC100280093 LOC100282509 LOC123044620 LOC123158275 LOC123143210 LOC123425811 LOC123407909 LOC123406123 LOC110434655 LOC8072534 LOC8081711 LOC100822537 LOC100832841 LOC100840541 CHLRE_05g241636v5
Function* transcription factor ILR3-like transcription factor bHLH115 bHLH transcription factor transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH104 transcription factor bHLH34 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor bHLH34 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3 transcription factor bHLH104 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 uncharacterized LOC100280093 uncharacterized LOC100282509 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3-like transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 transcription factor ILR3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 4
gma00071 Fatty acid degradation 3
gma00620 Pyruvate metabolism 3
gma00053 Ascorbate and aldarate metabolism 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 7
mtr00020 Citrate cycle (TCA cycle) 4
mtr01200 Carbon metabolism 4
mtr03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 3
mtr00020 Citrate cycle (TCA cycle) 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 2
ppo04120 Ubiquitin mediated proteolysis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath00760 Nicotinate and nicotinamide metabolism 2
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00640 Propanoate metabolism 4
ath00785 Lipoic acid metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00910 Nitrogen metabolism 2
bra00750 Vitamin B6 metabolism 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03420 Nucleotide excision repair 6
ghi04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 2
sot00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 5
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 6
nta00260 Glycine, serine and threonine metabolism 4
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta00750 Vitamin B6 metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 7
nta03250 Viral life cycle - HIV-1 2
nta03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00910 Nitrogen metabolism 5
osa01310 Nitrogen cycle 5
osa00195 Photosynthesis 3
osa00480 Glutathione metabolism 3
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 4
tae01200 Carbon metabolism 4
tae01210 2-Oxocarboxylic acid metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03015 mRNA surveillance pathway 4
bdi03013 Nucleocytoplasmic transport 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04081 Hormone signaling 2
cre00860 Porphyrin metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100813088 100803143 100783689 11419849 11445675 11409489 18095890 7492418 7470923 821899 827086 841529 103849035 103828768 103844925 100245935 100258884 100264856 107917918 107939864 107942996 106449668 106346014 106390538 127899974 102611674 102623026 101247632 101248331 101259956 102584960 102584888 102603905 107762037 107816467 107780376 4338978 4328080 4344627 118476893 100280093 100282509 123044620 123158275 123143210 123425811 123407909 123406123 110434655 8072534 8081711 100822537 100832841 100840541 66053434
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