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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100789663   50S ribosomal protein L22, chloroplastic 
 gma-r.7   100789663   50S ribosomal protein L22, chloroplastic 
 gma-u.5   100793854   50S ribosomal protein L22, chloroplastic 
 mtr-u.5   11418865   uncharacterized LOC11418865 
 ppo-u.5   7469929   uncharacterized LOC7469929 
 ath-u.5   AT4G28360   Ribosomal protein L22p/L17e family protein 
 ath-u.5   AT1G52370   Ribosomal protein L22p/L17e family protein 
 vvi-u.5   100266839   uncharacterized LOC100266839 
 sly-u.5   101254078   uncharacterized LOC101254078 
 osa-u.5   4326653   uncharacterized LOC4326653 
 zma-u.5   100274437   Ribosomal protein L22p/L17e-like 

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Top 50 coexpressed genes to 100789663 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100789663 (gma-u.5 coexpression data)

CoexMap"100789663"


gmaLOC100789663 | Entrez gene ID : 100789663      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (50 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_003552362.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  chlo 2,  nucl 1,  cyto 1,  cyto_nucl 1  (predict for XP_003552362.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003552362.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100789663

.
gma-r.7
for
100789663

.
gma-u.5
for
100793854

.
mtr-u.5
for
11418865

.
ppo-u.5
for
7469929

.
ath-u.5
for
AT4G28360

.
ath-u.5
for
AT1G52370

.
vvi-u.5
for
100266839

.
sly-u.5
for
101254078

.
osa-u.5
for
4326653

.
zma-u.5
for
100274437

.


Ortholog ID: 5356
Species ath ath gma gma sly osa zma bra bra vvi ppo mtr tae hvu ghi ghi bna bna cre sbi sot sot cit bdi bdi nta nta
Symbol AT4G28360 AT1G52370 LOC100789663 LOC100793854 LOC101254078 LOC4326653 LOC100274437 LOC108872310 LOC103855011 LOC100266839 LOC7469929 LOC11418865 LOC123075909 LOC123438842 LOC107928199 LOC107925692 LOC106405532 LOC125605311 CHLRE_05g242950v5 LOC8069115 LOC102601080 LOC102595065 LOC102608144 LOC100829255 LOC100833607 LOC107786285 LOC107790726
Function* Ribosomal protein L22p/L17e family protein Ribosomal protein L22p/L17e family protein 50S ribosomal protein L22, chloroplastic 50S ribosomal protein L22, chloroplastic uncharacterized LOC101254078 uncharacterized LOC4326653 Ribosomal protein L22p/L17e-like 50S ribosomal protein L22, chloroplastic 50S ribosomal protein L22 uncharacterized LOC100266839 uncharacterized LOC7469929 uncharacterized LOC11418865 50S ribosomal protein L22-like uncharacterized LOC123438842 50S ribosomal protein L22 50S ribosomal protein L22, chloroplastic 50S ribosomal protein L22-like 50S ribosomal protein L22-like uncharacterized protein uncharacterized LOC8069115 54S ribosomal protein L22, mitochondrial-like 50S ribosomal protein L22-like uncharacterized LOC102608144 uncharacterized LOC100829255 39S ribosomal protein L22, mitochondrial uncharacterized LOC107786285 uncharacterized LOC107790726
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 3
ath00020 Citrate cycle (TCA cycle) 2
ath01200 Carbon metabolism 2
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 13
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00061 Fatty acid biosynthesis 2
ppo01212 Fatty acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
ghi03010 Ribosome 2
ghi00340 Histidine metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00280 Valine, leucine and isoleucine degradation 2
bna00410 beta-Alanine metabolism 2
bna00640 Propanoate metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 5
bna00280 Valine, leucine and isoleucine degradation 2
bna00410 beta-Alanine metabolism 2
bna00640 Propanoate metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 6
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828951 841667 100789663 100793854 101254078 4326653 100274437 108872310 103855011 100266839 7469929 11418865 123075909 123438842 107928199 107925692 106405532 125605311 5726456 8069115 102601080 102595065 102608144 100829255 100833607 107786285 107790726
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