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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   547816   acidic ribosomal protein P0 
 gma-u.5   100777482   60S acidic ribosomal protein P0-like 
 mtr-u.5   11406082   60S acidic ribosomal protein P0 
 mtr-u.5   25483013   60S acidic ribosomal protein P0 
 mtr-u.5   11436630   60S acidic ribosomal protein P0 
 ppo-u.5   7474450   60S acidic ribosomal protein P0 
 ppo-u.5   112328511   60S acidic ribosomal protein P0 
 ath-u.5   AT2G40010   Ribosomal protein L10 family protein 
 ath-u.5   AT3G09200   Ribosomal protein L10 family protein 
 ath-u.5   AT3G11250   Ribosomal protein L10 family protein 
 vvi-u.5   100254737   large ribosomal subunit protein uL10 
 vvi-u.5   100250067   large ribosomal subunit protein uL10 
 sly-u.5   101258269   large ribosomal subunit protein uL10-like 
 sly-u.5   101268804   large ribosomal subunit protein uL10-like 
 sly-u.5   101261521   large ribosomal subunit protein uL10 
 osa-u.5   9270965   large ribosomal subunit protein uL10-like 
 osa-u.5   9266027   large ribosomal subunit protein uL10-like 
 osa-u.5   60SP0   60S acidic ribosomal protein P0-like 
 zma-u.5   542454   60S acidic ribosomal protein P0 
 zma-u.5   100273601   60S acidic ribosomal protein P0-2 

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Top 50 coexpressed genes to 547816 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 547816 (gma-u.5 coexpression data)

CoexMap"100791968"


gmaLOC100791968 | Entrez gene ID : 100791968      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 3 2 3 2 3 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0000027 [list] [network] ribosomal large subunit assembly  (46 genes)  IEA  
GO:0002181 [list] [network] cytoplasmic translation  (114 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (513 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (230 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (17 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_003538454.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  mito 4,  cyto_nucl 3  (predict for XP_003538454.1)
Subcellular
localization
TargetP
scret 5  (predict for XP_003538454.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
547816

.
gma-u.5
for
100777482

.
mtr-u.5
for
11406082

.
mtr-u.5
for
25483013

.
mtr-u.5
for
11436630

.
ppo-u.5
for
7474450

.
ppo-u.5
for
112328511

.
ath-u.5
for
AT2G40010

.
ath-u.5
for
AT3G09200

.
ath-u.5
for
AT3G11250

.
vvi-u.5
for
100254737

.
vvi-u.5
for
100250067

.
sly-u.5
for
101258269

.
sly-u.5
for
101268804

.
sly-u.5
for
101261521

.
osa-u.5
for
9270965

.
osa-u.5
for
9266027

.
osa-u.5
for
60SP0

.
zma-u.5
for
542454

.
zma-u.5
for
100273601

.


Ortholog ID: 2458
Species ath ath gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi bdi nta nta
Symbol AT3G11250 AT3G09200 LOC100777482 LOC101258269 LOC101268804 60SP0 LOC9266027 LOC100273601 LOC542454 LOC103848258 LOC103870557 LOC100254737 LOC100250067 LOC7474450 LOC112328511 LOC11406082 LOC25483013 LOC123169837 LOC123412650 LOC107934983 LOC107960342 LOC106439210 LOC106427969 CHLRE_12g520500v5 LOC8074077 LOC8063582 LOC102578519 LOC102614468 LOC104583534 LOC100835745 LOC107772468 LOC107801773
Function* Ribosomal protein L10 family protein Ribosomal protein L10 family protein 60S acidic ribosomal protein P0-like large ribosomal subunit protein uL10-like large ribosomal subunit protein uL10-like 60S acidic ribosomal protein P0-like large ribosomal subunit protein uL10-like 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2 large ribosomal subunit protein uL10 large ribosomal subunit protein uL10 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0-2 60S acidic ribosomal protein P0-2 uncharacterized protein 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0-like 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 60S acidic ribosomal protein P0 large ribosomal subunit protein uL10 large ribosomal subunit protein uL10z-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 17
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma03015 mRNA surveillance pathway 3
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
sly00520 Amino sugar and nucleotide sugar metabolism 2
sly01250 Biosynthesis of nucleotide sugars 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi00230 Purine metabolism 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 16
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
ppo03015 mRNA surveillance pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00770 Pantothenate and CoA biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 16
cre00220 Arginine biosynthesis 2
cre00250 Alanine, aspartate and glutamate metabolism 2
cre00630 Glyoxylate and dicarboxylate metabolism 2
cre00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 16
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 17
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi04120 Ubiquitin mediated proteolysis 5
bdi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03013 Nucleocytoplasmic transport 3
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta00040 Pentose and glucuronate interconversions 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820296 820076 100777482 101258269 101268804 4344590 9266027 100273601 542454 103848258 103870557 100254737 100250067 7474450 112328511 11406082 25483013 123169837 123412650 107934983 107960342 106439210 106427969 5722589 8074077 8063582 102578519 102614468 104583534 100835745 107772468 107801773
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