ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100792561	probable E3 ubiquitin-protein ligase RHB1A
gma-r.7	100792561	probable E3 ubiquitin-protein ligase RHB1A
gma-u.5	100790079	E3 ubiquitin-protein ligase At3g02290-like
gma-u.5	100804435	probable E3 ubiquitin-protein ligase RHB1A
gma-u.5	100812687	probable E3 ubiquitin-protein ligase RHB1A
mtr-u.5	11446191	probable E3 ubiquitin-protein ligase RHB1A
mtr-u.5	120577136	probable E3 ubiquitin-protein ligase RHB1A
mtr-u.5	25502075	probable E3 ubiquitin-protein ligase RHB1A
ppo-u.5	7494097	probable E3 ubiquitin-protein ligase RHB1A
ppo-u.5	7458187	probable E3 ubiquitin-protein ligase RHB1A
ppo-u.5	7457351	probable E3 ubiquitin-protein ligase RHB1A
ath-u.5	RHB1A	RING-H2 finger B1A
ath-u.5	AIRP1	RING/U-box superfamily protein
ath-u.5	AT5G41350	RING/U-box superfamily protein
vvi-u.5	100256755	probable E3 ubiquitin-protein ligase RHB1A
vvi-u.5	100248355	probable E3 ubiquitin-protein ligase RHB1A
sly-u.5	101264761	probable E3 ubiquitin-protein ligase RHB1A
sly-u.5	101252613	probable E3 ubiquitin-protein ligase RHB1A
osa-u.5	4348088	probable E3 ubiquitin-protein ligase RHB1A
osa-u.5	4350310	probable E3 ubiquitin-protein ligase RHB1A
zma-u.5	100281881	uncharacterized LOC100281881
zma-u.5	100193862	uncharacterized LOC100193862

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005829 [list] [network] cytosol

(1702 genes)

IEA

GO MF

GO:0004842 [list] [network] ubiquitin-protein transferase activity

(548 genes)

IEA

Protein

XP_003528846.1 [sequence] [blastp]
XP_006583284.1 [sequence] [blastp]
XP_006583285.1 [sequence] [blastp]
XP_025984955.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, chlo 2, cyto 1, extr 1, chlo_mito 1	(predict for XP_003528846.1)
nucl 4, chlo 2, cyto 1, extr 1, chlo_mito 1	(predict for XP_006583284.1)
nucl 4, chlo 2, cyto 1, extr 1, chlo_mito 1	(predict for XP_006583285.1)
nucl 4, chlo 2, cyto 1, extr 1, chlo_mito 1	(predict for XP_025984955.1)

Subcellular
localization
TargetP

other 5, mito 4	(predict for XP_003528846.1)
other 5, mito 4	(predict for XP_006583284.1)
other 5, mito 4	(predict for XP_006583285.1)
other 5, mito 4	(predict for XP_025984955.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100792561	gma-r.7 for 100792561	gma-u.5 for 100790079	gma-u.5 for 100804435	gma-u.5 for 100812687	mtr-u.5 for 11446191	mtr-u.5 for 120577136	mtr-u.5 for 25502075	ppo-u.5 for 7494097	ppo-u.5 for 7458187	ppo-u.5 for 7457351	ath-u.5 for RHB1A	ath-u.5 for AIRP1	ath-u.5 for AT5G41350	vvi-u.5 for 100256755	vvi-u.5 for 100248355	sly-u.5 for 101264761	sly-u.5 for 101252613	osa-u.5 for 4348088	osa-u.5 for 4350310	zma-u.5 for 100281881	zma-u.5 for 100193862

Ortholog

Ortholog ID: 2168

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

AIRP1

Function^*

E3 ubiquitin-protein ligase At3g02290-like