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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   125574878   probable E3 ubiquitin-protein ligase RHB1A 
 bna-r.1   106397089   E3 ubiquitin-protein ligase AIRP1 
 bna-r.1   106352716   probable E3 ubiquitin-protein ligase RHB1A 
 bna-r.1   106446261   probable E3 ubiquitin-protein ligase RHB1A 
 bra-r.6   103861042   E3 ubiquitin-protein ligase AIRP1 
 bra-r.6   103864076   probable E3 ubiquitin-protein ligase RHB1A 
 ath-u.5   RHB1A   RING-H2 finger B1A 
 ath-u.5   AIRP1   RING/U-box superfamily protein 
 ath-u.5   AT5G41350   RING/U-box superfamily protein 
 ghi-r.1   107931869   probable E3 ubiquitin-protein ligase RHB1A 
 ghi-r.1   107941521   probable E3 ubiquitin-protein ligase RHB1A 
 ghi-r.1   107947040   probable E3 ubiquitin-protein ligase RHB1A 
 cit-r.1   102612420   probable E3 ubiquitin-protein ligase RHB1A 
 cit-r.1   102624405   probable E3 ubiquitin-protein ligase RHB1A 
 cit-r.1   127901532   probable E3 ubiquitin-protein ligase RHB1A 
 gma-u.5   100792561   probable E3 ubiquitin-protein ligase RHB1A 
 gma-u.5   100790079   E3 ubiquitin-protein ligase At3g02290-like 
 gma-u.5   100804435   probable E3 ubiquitin-protein ligase RHB1A 
 vvi-u.5   100256755   probable E3 ubiquitin-protein ligase RHB1A 
 vvi-u.5   100248355   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7494097   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7457351   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7458187   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   120577136   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   11446191   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   25502075   probable E3 ubiquitin-protein ligase RHB1A 
 sly-u.5   101264761   probable E3 ubiquitin-protein ligase RHB1A 
 sly-u.5   101252613   probable E3 ubiquitin-protein ligase RHB1A 
 sot-r.1   102604658   E3 ubiquitin-protein ligase At3g02290 
 sot-r.1   102591311   E3 ubiquitin-protein ligase At3g02290 
 nta-r.1   107832031   putative E3 ubiquitin-protein ligase RHB1A 
 nta-r.1   107807620   putative E3 ubiquitin-protein ligase RHB1A 
 nta-r.1   107805494   putative E3 ubiquitin-protein ligase RHB1A 
 osa-u.5   4348088   probable E3 ubiquitin-protein ligase RHB1A 
 osa-u.5   4350310   probable E3 ubiquitin-protein ligase RHB1A 
 zma-u.5   100281881   uncharacterized LOC100281881 
 zma-u.5   100193862   uncharacterized LOC100193862 
 tae-r.2   123139916   probable E3 ubiquitin-protein ligase RHB1A 
 tae-r.2   123146223   probable E3 ubiquitin-protein ligase RHB1A 
 tae-r.2   123129052   probable E3 ubiquitin-protein ligase RHB1A 
 hvu-r.1   123401943   probable E3 ubiquitin-protein ligase RHB1A 
 sbi-r.1   8055328   probable E3 ubiquitin-protein ligase RHB1A 
 sbi-r.1   8062809   probable E3 ubiquitin-protein ligase RHB1A 
 bdi-r.1   100839918   probable E3 ubiquitin-protein ligase RHB1A 

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Top 50 coexpressed genes to 125574878 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 125574878 (bna-r.1 coexpression data)

CoexMap"125574878"


bnaLOC125574878 | Entrez gene ID : 125574878    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 3 3 2 3 3 2 2 3 2 2 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1079 genes)  IEA  
Protein XP_048633476.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1  (predict for XP_048633476.1)
Subcellular
localization
TargetP
mito 5,  other 3  (predict for XP_048633476.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
125574878
bna-r.1
for
106397089
bna-r.1
for
106352716
bna-r.1
for
106446261
bra-r.6
for
103861042
bra-r.6
for
103864076
ath-u.5
for
RHB1A
ath-u.5
for
AIRP1
ath-u.5
for
AT5G41350
ghi-r.1
for
107931869
ghi-r.1
for
107941521
ghi-r.1
for
107947040
cit-r.1
for
102612420
cit-r.1
for
102624405
cit-r.1
for
127901532
gma-u.5
for
100792561
gma-u.5
for
100790079
gma-u.5
for
100804435
vvi-u.5
for
100256755
vvi-u.5
for
100248355
ppo-u.5
for
7494097
ppo-u.5
for
7457351
ppo-u.5
for
7458187
mtr-u.5
for
120577136
mtr-u.5
for
11446191
mtr-u.5
for
25502075
sly-u.5
for
101264761
sly-u.5
for
101252613
sot-r.1
for
102604658
sot-r.1
for
102591311
nta-r.1
for
107832031
nta-r.1
for
107807620
nta-r.1
for
107805494
osa-u.5
for
4348088
osa-u.5
for
4350310
zma-u.5
for
100281881
zma-u.5
for
100193862
tae-r.2
for
123139916
tae-r.2
for
123146223
tae-r.2
for
123129052
hvu-r.1
for
123401943
sbi-r.1
for
8055328
sbi-r.1
for
8062809
bdi-r.1
for
100839918


Ortholog ID: 2168
Species bna bna bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi sbi bdi
Symbol LOC106352716 LOC106441224 LOC103861042 LOC103864076 RHB1A AIRP1 AT5G41350 LOC107947040 LOC107924490 LOC121219109 LOC102612420 LOC102624405 LOC127901532 LOC100790079 LOC100804435 LOC100812687 LOC100256755 LOC100248355 LOC7457351 LOC7458187 LOC7472755 LOC120577136 LOC11446191 LOC25502075 LOC101264761 LOC101252613 LOC102604658 LOC102591311 LOC107807620 LOC107805494 LOC107782595 LOC4348088 LOC4350310 LOC100281881 LOC100193862 LOC123139916 LOC123146223 LOC123129052 LOC123401943 LOC8055328 LOC8062809 LOC100839918
Function* probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase AIRP1 E3 ubiquitin-protein ligase AIRP1 probable E3 ubiquitin-protein ligase RHB1A RING-H2 finger B1A RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase At3g02290-like probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 putative E3 ubiquitin-protein ligase RHB1A putative E3 ubiquitin-protein ligase RHB1A putative E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A uncharacterized LOC100281881 uncharacterized LOC100193862 probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 3
ghi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 4
cit04142 Lysosome 4
cit04145 Phagosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04142 Lysosome 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04075 Plant hormone signal transduction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00790 Folate biosynthesis 3
tae01240 Biosynthesis of cofactors 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03082 ATP-dependent chromatin remodeling 2
hvu04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106352716 106441224 103861042 103864076 828093 828444 834137 107947040 107924490 121219109 102612420 102624405 127901532 100790079 100804435 100812687 100256755 100248355 7457351 7458187 7472755 120577136 11446191 25502075 101264761 101252613 102604658 102591311 107807620 107805494 107782595 4348088 4350310 100281881 100193862 123139916 123146223 123129052 123401943 8055328 8062809 100839918
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