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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107807620   putative E3 ubiquitin-protein ligase RHB1A 
 sly-u.5   101264761   probable E3 ubiquitin-protein ligase RHB1A 
 sly-u.5   101252613   probable E3 ubiquitin-protein ligase RHB1A 
 ath-u.5   RHB1A   RING-H2 finger B1A 
 ath-u.5   AIRP1   RING/U-box superfamily protein 
 ath-u.5   AT5G41350   RING/U-box superfamily protein 
 gma-u.5   100792561   probable E3 ubiquitin-protein ligase RHB1A 
 gma-u.5   100790079   E3 ubiquitin-protein ligase At3g02290-like 
 gma-u.5   100804435   probable E3 ubiquitin-protein ligase RHB1A 
 vvi-u.5   100256755   probable E3 ubiquitin-protein ligase RHB1A 
 vvi-u.5   100248355   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7494097   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7458187   probable E3 ubiquitin-protein ligase RHB1A 
 ppo-u.5   7457351   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   11446191   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   120577136   probable E3 ubiquitin-protein ligase RHB1A 
 mtr-u.5   25502075   probable E3 ubiquitin-protein ligase RHB1A 
 osa-u.5   4348088   probable E3 ubiquitin-protein ligase RHB1A 
 osa-u.5   4350310   probable E3 ubiquitin-protein ligase RHB1A 
 zma-u.5   100281881   uncharacterized LOC100281881 
 zma-u.5   100193862   uncharacterized LOC100193862 

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Top 50 coexpressed genes to 107807620 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107807620 (nta-r.1 coexpression data)

CoexMap"107807620"


ntaLOC107807620 | Entrez gene ID : 107807620      
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 2 3 3 2 3 3 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (1509 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (660 genes)  IEA  
Protein XP_075073957.1 [sequence] [blastp]
XP_075073958.1 [sequence] [blastp]
XP_075073959.1 [sequence] [blastp]
XP_075073960.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  pero 4,  chlo 1  (predict for XP_075073957.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_075073958.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_075073959.1)
nucl 4,  pero 4,  chlo 1  (predict for XP_075073960.1)
Subcellular
localization
TargetP
other 5,  mito 5  (predict for XP_075073957.1)
other 5,  mito 5  (predict for XP_075073958.1)
other 5,  mito 5  (predict for XP_075073959.1)
other 5,  mito 5  (predict for XP_075073960.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107807620
sly-u.5
for
101264761
sly-u.5
for
101252613
ath-u.5
for
RHB1A
ath-u.5
for
AIRP1
ath-u.5
for
AT5G41350
gma-u.5
for
100792561
gma-u.5
for
100790079
gma-u.5
for
100804435
vvi-u.5
for
100256755
vvi-u.5
for
100248355
ppo-u.5
for
7494097
ppo-u.5
for
7458187
ppo-u.5
for
7457351
mtr-u.5
for
11446191
mtr-u.5
for
120577136
mtr-u.5
for
25502075
osa-u.5
for
4348088
osa-u.5
for
4350310
zma-u.5
for
100281881
zma-u.5
for
100193862


Ortholog ID: 2168
Species nta nta sly sly sot sot ath ath gma gma bra bra vvi vvi ppo ppo mtr mtr ghi ghi bna cit cit osa osa zma zma tae tae hvu sbi sbi bdi
Symbol LOC107805494 LOC107807620 LOC101252613 LOC101264761 LOC102591311 LOC102604658 AIRP1 AT5G41350 LOC100790079 LOC100804435 LOC103864076 LOC103861042 LOC100248355 LOC100256755 LOC7457351 LOC7472755 LOC120577136 LOC25502075 LOC107924490 LOC107947040 LOC106441224 LOC127901532 LOC102624405 LOC4350310 LOC4348088 LOC100281881 LOC100193862 LOC123139916 LOC123129052 LOC123401943 LOC8055328 LOC8062809 LOC100839918
Function* putative E3 ubiquitin-protein ligase RHB1A putative E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase At3g02290 E3 ubiquitin-protein ligase At3g02290 RING/U-box superfamily protein RING/U-box superfamily protein E3 ubiquitin-protein ligase At3g02290-like probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase AIRP1 probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A E3 ubiquitin-protein ligase AIRP1 probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A uncharacterized LOC100281881 uncharacterized LOC100193862 probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A probable E3 ubiquitin-protein ligase RHB1A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04075 Plant hormone signal transduction 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma03420 Nucleotide excision repair 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr03083 Polycomb repressive complex 2
mtr04120 Ubiquitin mediated proteolysis 2
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 3
ghi04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit04142 Lysosome 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03082 ATP-dependent chromatin remodeling 2
hvu04130 SNARE interactions in vesicular transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107805494 107807620 101252613 101264761 102591311 102604658 828444 834137 100790079 100804435 103864076 103861042 100248355 100256755 7457351 7472755 120577136 25502075 107924490 107947040 106441224 127901532 102624405 4350310 4348088 100281881 100193862 123139916 123129052 123401943 8055328 8062809 100839918
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