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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100793247   uncharacterized LOC100793247 
 gma-r.7   100793247   uncharacterized LOC100793247 
 gma-u.5   100812372   DNA polymerase delta subunit 3 
 mtr-u.5   11408397   DNA polymerase delta subunit 3 
 ppo-u.5   18095449   uncharacterized LOC18095449 
 ath-u.5   POLD3   DNA-directed DNA polymerase 
 bra-r.6   103832343   DNA polymerase delta subunit 3 
 vvi-u.5   100250468   uncharacterized LOC100250468 
 ghi-r.1   107934693   uncharacterized LOC107934693 
 ghi-r.1   107948791   nucleolar and coiled-body phosphoprotein 1 
 ghi-r.1   107917216   uncharacterized LOC107917216 
 bna-r.1   106354683   neurofilament heavy polypeptide 
 bna-r.1   106356007   DNA polymerase delta subunit 3 
 cit-r.1   102608043   uncharacterized LOC102608043 
 sly-u.5   101258997   uncharacterized LOC101258997 
 sot-r.1   102581685   uncharacterized LOC102581685 
 nta-r.1   107792496   uncharacterized LOC107792496 
 osa-u.5   4327080   uncharacterized LOC4327080 
 zma-u.5   103642327   uncharacterized LOC103642327 
 zma-u.5   100279971   uncharacterized LOC100279971 
 tae-r.2   123077688   protein IWS1 homolog A 
 tae-r.2   123069162   protein IWS1 homolog A 
 tae-r.2   123060609   protein IWS1 homolog A 
 hvu-r.1   123443095   nucleolar protein dao-5 
 sbi-r.1   8080502   uncharacterized LOC8080502 
 bdi-r.1   100831421   protein IWS1 homolog A 
 cre-r.1   CHLRE_03g202250v5   uncharacterized protein 

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Top 50 coexpressed genes to 100793247 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100793247 (gma-u.5 coexpression data)

CoexMap"100793247"


gmaLOC100793247 | Entrez gene ID : 100793247    
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 3 2 1 1 1 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03030 [list] [network] DNA replication (69 genes)
gmx03410 [list] [network] Base excision repair (77 genes)
gmx03420 [list] [network] Nucleotide excision repair (129 genes)
gmx03430 [list] [network] Mismatch repair (49 genes)
gmx03440 [list] [network] Homologous recombination (74 genes)
GO BP
GO:1904161 [list] [network] DNA synthesis involved in UV-damage excision repair  (2 genes)  IEA  
GO:0006297 [list] [network] nucleotide-excision repair, DNA gap filling  (9 genes)  IEA  
GO:0006271 [list] [network] DNA strand elongation involved in DNA replication  (28 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0043625 [list] [network] delta DNA polymerase complex  (8 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (30 genes)  IEA  
Protein XP_014621364.1 [sequence] [blastp]
XP_014621365.1 [sequence] [blastp]
XP_014621366.1 [sequence] [blastp]
XP_025980916.1 [sequence] [blastp]
XP_040864330.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 3,  cyto_pero 3  (predict for XP_014621364.1)
cyto 4,  nucl 3,  cyto_pero 3  (predict for XP_014621365.1)
cyto 4,  chlo 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_014621366.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_025980916.1)
cyto 4,  chlo 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_040864330.1)
Subcellular
localization
TargetP
other 4,  scret 4  (predict for XP_014621364.1)
other 4,  scret 4  (predict for XP_014621365.1)
other 4,  scret 4  (predict for XP_014621366.1)
other 4,  scret 3  (predict for XP_025980916.1)
other 4,  scret 4  (predict for XP_040864330.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100793247
gma-r.7
for
100793247
gma-u.5
for
100812372
mtr-u.5
for
11408397
ppo-u.5
for
18095449
ath-u.5
for
POLD3
bra-r.6
for
103832343
vvi-u.5
for
100250468
ghi-r.1
for
107934693
ghi-r.1
for
107948791
ghi-r.1
for
107917216
bna-r.1
for
106354683
bna-r.1
for
106356007
cit-r.1
for
102608043
sly-u.5
for
101258997
sot-r.1
for
102581685
nta-r.1
for
107792496
osa-u.5
for
4327080
zma-u.5
for
103642327
zma-u.5
for
100279971
tae-r.2
for
123077688
tae-r.2
for
123069162
tae-r.2
for
123060609
hvu-r.1
for
123443095
sbi-r.1
for
8080502
bdi-r.1
for
100831421
cre-r.1
for
CHLRE_03g202250v5


Ortholog ID: 8315
Species gma gma mtr ppo ath bra vvi ghi ghi ghi bna bna cit sly sot nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC100793247 LOC100812372 LOC11408397 LOC18095449 POLD3 LOC103832343 LOC100250468 LOC107934693 LOC107917216 LOC107897258 LOC106354683 LOC106356007 LOC102608043 LOC101258997 LOC102581685 LOC107792496 LOC4327080 LOC103642327 LOC100279971 LOC100194011 LOC123077688 LOC123069162 LOC123060609 LOC123443095 LOC8080502 LOC100831421 CHLRE_03g202250v5
Function* uncharacterized LOC100793247 DNA polymerase delta subunit 3 DNA polymerase delta subunit 3 uncharacterized LOC18095449 DNA-directed DNA polymerase DNA polymerase delta subunit 3 uncharacterized LOC100250468 uncharacterized LOC107934693 uncharacterized LOC107917216 nucleolar and coiled-body phosphoprotein 1 neurofilament heavy polypeptide DNA polymerase delta subunit 3 uncharacterized LOC102608043 uncharacterized LOC101258997 uncharacterized LOC102581685 uncharacterized LOC107792496 uncharacterized LOC4327080 uncharacterized LOC103642327 uncharacterized LOC100279971 DNA-directed DNA polymerases protein IWS1 homolog A protein IWS1 homolog A protein IWS1 homolog A nucleolar protein dao-5 uncharacterized LOC8080502 protein IWS1 homolog A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 4
ppo03030 DNA replication 4
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03430 Mismatch repair 5
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03430 Mismatch repair 6
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 12
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 6
osa03440 Homologous recombination 5
osa03030 DNA replication 5
osa03420 Nucleotide excision repair 5
osa03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 6
cre03420 Nucleotide excision repair 6
cre03430 Mismatch repair 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100793247 100812372 11408397 18095449 844201 103832343 100250468 107934693 107917216 107897258 106354683 106356007 102608043 101258997 102581685 107792496 4327080 103642327 100279971 100194011 123077688 123069162 123060609 123443095 8080502 100831421 5718901
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