Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106354683   neurofilament heavy polypeptide 
 bna-r.1   106356007   DNA polymerase delta subunit 3 
 bra-r.6   103832343   DNA polymerase delta subunit 3 
 ath-u.5   POLD3   DNA-directed DNA polymerase 
 ghi-r.1   107948791   nucleolar and coiled-body phosphoprotein 1 
 ghi-r.1   107934693   uncharacterized LOC107934693 
 ghi-r.1   107917216   uncharacterized LOC107917216 
 cit-r.1   102608043   uncharacterized LOC102608043 
 gma-u.5   100812372   DNA polymerase delta subunit 3 
 gma-u.5   100793247   uncharacterized LOC100793247 
 vvi-u.5   100250468   uncharacterized LOC100250468 
 ppo-u.5   18095449   uncharacterized LOC18095449 
 mtr-u.5   11408397   DNA polymerase delta subunit 3 
 sly-u.5   101258997   uncharacterized LOC101258997 
 sot-r.1   102581685   uncharacterized LOC102581685 
 nta-r.1   107792496   uncharacterized LOC107792496 
 osa-u.5   4327080   uncharacterized LOC4327080 
 zma-u.5   100279971   uncharacterized LOC100279971 
 zma-u.5   100194011   DNA-directed DNA polymerases 
 tae-r.2   123060609   protein IWS1 homolog A 
 tae-r.2   123069162   protein IWS1 homolog A 
 tae-r.2   123077688   protein IWS1 homolog A 
 hvu-r.1   123443095   nucleolar protein dao-5 
 sbi-r.1   8080502   uncharacterized LOC8080502 
 bdi-r.1   100831421   protein IWS1 homolog A 
 cre-r.1   CHLRE_03g202250v5   uncharacterized protein 

close


Top 50 coexpressed genes to 106354683 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106354683 (bna-r.1 coexpression data)

CoexMap"106354683"


bnaLOC106354683 | Entrez gene ID : 106354683    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 3 1 2 1 1 1 1 1 1 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03030 [list] [network] DNA replication (118 genes)
bna03410 [list] [network] Base excision repair (126 genes)
bna03420 [list] [network] Nucleotide excision repair (233 genes)
bna03430 [list] [network] Mismatch repair (77 genes)
bna03440 [list] [network] Homologous recombination (136 genes)
GO BP
GO:1904161 [list] [network] DNA synthesis involved in UV-damage excision repair  (2 genes)  IEA  
GO:0006297 [list] [network] nucleotide-excision repair, DNA gap filling  (8 genes)  IEA  
GO:0006271 [list] [network] DNA strand elongation involved in DNA replication  (44 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (669 genes)  IEA  
GO CC
GO:0043625 [list] [network] delta DNA polymerase complex  (9 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (51 genes)  IEA  
Protein XP_013650139.1 [sequence] [blastp]
XP_013650140.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_013650139.1)
nucl 8,  cyto 1  (predict for XP_013650140.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013650139.1)
other 8  (predict for XP_013650140.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106354683
bna-r.1
for
106356007
bra-r.6
for
103832343
ath-u.5
for
POLD3
ghi-r.1
for
107948791
ghi-r.1
for
107934693
ghi-r.1
for
107917216
cit-r.1
for
102608043
gma-u.5
for
100812372
gma-u.5
for
100793247
vvi-u.5
for
100250468
ppo-u.5
for
18095449
mtr-u.5
for
11408397
sly-u.5
for
101258997
sot-r.1
for
102581685
nta-r.1
for
107792496
osa-u.5
for
4327080
zma-u.5
for
100279971
zma-u.5
for
100194011
tae-r.2
for
123060609
tae-r.2
for
123069162
tae-r.2
for
123077688
hvu-r.1
for
123443095
sbi-r.1
for
8080502
bdi-r.1
for
100831421
cre-r.1
for
CHLRE_03g202250v5


Ortholog ID: 8315
Species bna bna bra ath ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106354683 LOC106356007 LOC103832343 POLD3 LOC107934693 LOC107917216 LOC107897258 LOC102608043 LOC100812372 LOC100793247 LOC100250468 LOC18095449 LOC11408397 LOC101258997 LOC102581685 LOC107792496 LOC4327080 LOC100279971 LOC100194011 LOC103642327 LOC123060609 LOC123069162 LOC123077688 LOC123443095 LOC8080502 LOC100831421 CHLRE_03g202250v5
Function* neurofilament heavy polypeptide DNA polymerase delta subunit 3 DNA polymerase delta subunit 3 DNA-directed DNA polymerase uncharacterized LOC107934693 uncharacterized LOC107917216 nucleolar and coiled-body phosphoprotein 1 uncharacterized LOC102608043 DNA polymerase delta subunit 3 uncharacterized LOC100793247 uncharacterized LOC100250468 uncharacterized LOC18095449 DNA polymerase delta subunit 3 uncharacterized LOC101258997 uncharacterized LOC102581685 uncharacterized LOC107792496 uncharacterized LOC4327080 uncharacterized LOC100279971 DNA-directed DNA polymerases uncharacterized LOC103642327 protein IWS1 homolog A protein IWS1 homolog A protein IWS1 homolog A nucleolar protein dao-5 uncharacterized LOC8080502 protein IWS1 homolog A uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03430 Mismatch repair 5
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 7
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 10
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03430 Mismatch repair 6
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 8
ghi03410 Base excision repair 6
ghi03420 Nucleotide excision repair 4
ghi03430 Mismatch repair 4
ghi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 4
gma03420 Nucleotide excision repair 4
gma03430 Mismatch repair 4
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03430 Mismatch repair 5
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03430 Mismatch repair 4
ppo03030 DNA replication 4
ppo03420 Nucleotide excision repair 2
ppo03440 Homologous recombination 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 10
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 12
sly03420 Nucleotide excision repair 3
sly03430 Mismatch repair 3
sly03440 Homologous recombination 2
sly03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03430 Mismatch repair 3
sot03030 DNA replication 2
sot03410 Base excision repair 2
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03430 Mismatch repair 6
osa03440 Homologous recombination 5
osa03030 DNA replication 5
osa03420 Nucleotide excision repair 5
osa03410 Base excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 3
zma03410 Base excision repair 3
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03420 Nucleotide excision repair 3
bdi03030 DNA replication 2
bdi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03410 Base excision repair 6
cre03420 Nucleotide excision repair 6
cre03430 Mismatch repair 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106354683 106356007 103832343 844201 107934693 107917216 107897258 102608043 100812372 100793247 100250468 18095449 11408397 101258997 102581685 107792496 4327080 100279971 100194011 103642327 123060609 123069162 123077688 123443095 8080502 100831421 5718901
The preparation time of this page was 0.1 [sec].