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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100794144   RAP domain-containing protein, chloroplastic 
 gma-r.7   100794144   RAP domain-containing protein, chloroplastic 
 gma-m.5   100794144   RAP domain-containing protein, chloroplastic 
 gma-u.5   100805208   RAP domain-containing protein, chloroplastic 
 mtr-u.5   25502299   RAP domain-containing protein, chloroplastic 
 ppo-u.5   18106372   RAP domain-containing protein, chloroplastic 
 ath-u.5   RAP   RAP 
 vvi-u.5   100257808   RAP domain-containing protein, chloroplastic 
 ghi-r.1   107928108   RAP domain-containing protein, chloroplastic 
 ghi-r.1   107962352   RAP domain-containing protein, chloroplastic 
 bna-r.1   106387987   RAP domain-containing protein, chloroplastic 
 bna-r.1   106437711   RAP domain-containing protein, chloroplastic 
 cit-r.1   102607518   RAP domain-containing protein, chloroplastic 
 sly-u.5   101258337   RAP domain-containing protein, chloroplastic 
 sot-r.1   102585574   uncharacterized LOC102585574 
 nta-r.1   107769616   RAP domain-containing protein, chloroplastic 
 nta-r.1   107814648   RAP domain-containing protein, chloroplastic 
 osa-u.5   AL1   Albino Leaf1 
 zma-u.5   103649620   RAP 
 tae-r.2   123077249   RAP domain-containing protein, chloroplastic 
 tae-r.2   123068747   RAP domain-containing protein, chloroplastic 
 tae-r.2   123060241   RAP domain-containing protein, chloroplastic 
 hvu-r.1   123442779   RAP domain-containing protein, chloroplastic 
 sbi-r.1   8082831   RAP domain-containing protein, chloroplastic 
 bdi-r.1   100844423   RAP domain-containing protein, chloroplastic 
 cre-r.1   CHLRE_09g389541v5   uncharacterized protein 

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Top 50 coexpressed genes to 100794144 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100794144 (gma-u.5 coexpression data)

CoexMap"100794144"


gmaLOC100794144 | Entrez gene ID : 100794144      
Species gma mtr ppo ath vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre bra
Paralog 4 1 1 1 1 2 2 1 1 1 2 1 1 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044528 [list] [network] regulation of mitochondrial mRNA stability  (2 genes)  IEA  
GO:0000963 [list] [network] mitochondrial RNA processing  (16 genes)  IEA  
GO:1901259 [list] [network] chloroplast rRNA processing  (32 genes)  IEA  
GO CC
GO:0035770 [list] [network] ribonucleoprotein granule  (114 genes)  IEA  
GO:0005759 [list] [network] mitochondrial matrix  (134 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_003529957.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  cyto 2  (predict for XP_003529957.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_003529957.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100794144
gma-r.7
for
100794144
gma-m.5
for
100794144
gma-u.5
for
100805208
mtr-u.5
for
25502299
ppo-u.5
for
18106372
ath-u.5
for
RAP
vvi-u.5
for
100257808
ghi-r.1
for
107928108
ghi-r.1
for
107962352
bna-r.1
for
106387987
bna-r.1
for
106437711
cit-r.1
for
102607518
sly-u.5
for
101258337
sot-r.1
for
102585574
nta-r.1
for
107769616
nta-r.1
for
107814648
osa-u.5
for
AL1
zma-u.5
for
103649620
tae-r.2
for
123077249
tae-r.2
for
123068747
tae-r.2
for
123060241
hvu-r.1
for
123442779
sbi-r.1
for
8082831
bdi-r.1
for
100844423
cre-r.1
for
CHLRE_09g389541v5


Ortholog ID: 10015
Species gma gma mtr ppo ath vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100794144 LOC100805208 LOC25502299 LOC18106372 RAP LOC100257808 LOC107928108 LOC107962352 LOC106387987 LOC106437711 LOC102607518 LOC101258337 LOC102585574 LOC107769616 LOC107814648 AL1 LOC103649620 LOC123077249 LOC123068747 LOC123060241 LOC123442779 LOC8082831 LOC100844423 CHLRE_09g389541v5
Function* RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic uncharacterized LOC102585574 RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic Albino Leaf1 RAP RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100794144 100805208 25502299 18106372 817747 100257808 107928108 107962352 106387987 106437711 102607518 101258337 102585574 107769616 107814648 4333151 103649620 123077249 123068747 123060241 123442779 8082831 100844423 5720612
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