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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106437711   RAP domain-containing protein, chloroplastic 
 ath-u.5   RAP   RAP 
 gma-u.5   100805208   RAP domain-containing protein, chloroplastic 
 gma-u.5   100794144   RAP domain-containing protein, chloroplastic 
 vvi-u.5   100257808   RAP domain-containing protein, chloroplastic 
 ppo-u.5   18106372   RAP domain-containing protein, chloroplastic 
 mtr-u.5   25502299   RAP domain-containing protein, chloroplastic 
 sly-u.5   101258337   RAP domain-containing protein, chloroplastic 
 osa-u.5   AL1   Albino Leaf1 
 zma-u.5   103649620   RAP 

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Top 50 coexpressed genes to 106437711 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106437711 (bna-r.1 coexpression data)

CoexMap"106437711"


bnaLOC106437711 | Entrez gene ID : 106437711    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0044528 [list] [network] regulation of mitochondrial mRNA stability  (2 genes)  IEA  
GO:1901259 [list] [network] chloroplast rRNA processing  (13 genes)  IEA  
GO:0000963 [list] [network] mitochondrial RNA processing  (21 genes)  IEA  
GO CC
GO:0035770 [list] [network] ribonucleoprotein granule  (249 genes)  IEA  
GO:0005759 [list] [network] mitochondrial matrix  (259 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_013734108.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_013734108.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_013734108.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106437711
ath-u.5
for
RAP
gma-u.5
for
100805208
gma-u.5
for
100794144
vvi-u.5
for
100257808
ppo-u.5
for
18106372
mtr-u.5
for
25502299
sly-u.5
for
101258337
osa-u.5
for
AL1
zma-u.5
for
103649620


Ortholog ID: 10015
Species bna bna ath ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106387987 LOC106437711 RAP LOC107928108 LOC107962352 LOC102607518 LOC100794144 LOC100805208 LOC100257808 LOC18106372 LOC25502299 LOC101258337 LOC102585574 LOC107769616 LOC107814648 AL1 LOC103649620 LOC123060241 LOC123068747 LOC123442779 LOC8082831 LOC100844423 CHLRE_09g389541v5
Function* RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic uncharacterized LOC102585574 RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic Albino Leaf1 RAP RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic RAP domain-containing protein, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04626 Plant-pathogen interaction 3
bna03060 Protein export 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00710 Carbon fixation by Calvin cycle 2
sbi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387987 106437711 817747 107928108 107962352 102607518 100794144 100805208 100257808 18106372 25502299 101258337 102585574 107769616 107814648 4333151 103649620 123060241 123068747 123442779 8082831 100844423 5720612
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