ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100794371	protein CTR9 homolog
gma-r.7	100794371	protein CTR9 homolog
gma-u.5	100804954	protein CTR9 homolog
mtr-u.5	25486489	protein CTR9 homolog
ppo-u.5	18100352	protein CTR9 homolog
ath-u.5	ELF8	binding protein
vvi-u.5	100252478	protein CTR9 homolog
sly-u.5	101255810	protein CTR9 homolog
osa-u.5	4343217	protein CTR9 homolog
zma-u.5	103646054	protein CTR9 homolog
zma-u.5	103631951	protein CTR9 homolog

functional annotation

KEGG

GO BP

GO:0006368 [list] [network] transcription elongation by RNA polymerase II	(35 genes)	IEA
GO:0006355 [list] [network] regulation of DNA-templated transcription	(3122 genes)	IEA

GO CC

GO:0016593 [list] [network] Cdc73/Paf1 complex

(16 genes)

IEA

GO MF

GO:0000993 [list] [network] RNA polymerase II complex binding

(35 genes)

IEA

Protein

XP_006587039.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, nucl 3, cyto_pero 3, cyto_plas 3

(predict for XP_006587039.1)

Subcellular
localization
TargetP

other 7

(predict for XP_006587039.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100794371	gma-r.7 for 100794371	gma-u.5 for 100804954	mtr-u.5 for 25486489	ppo-u.5 for 18100352	ath-u.5 for ELF8	vvi-u.5 for 100252478	sly-u.5 for 101255810	osa-u.5 for 4343217	zma-u.5 for 103646054	zma-u.5 for 103631951

Ortholog ID: 9380

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

ELF8

Function^*

protein CTR9 homolog

binding protein

protein CTR9 homolog

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4
mtr03015	mRNA surveillance pathway	2
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03250	Viral life cycle - HIV-1	5
bna03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03040	Spliceosome	2
nta03440	Homologous recombination	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03022	Basal transcription factors	2
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4
osa03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	3
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae03013	Nucleocytoplasmic transport	3
tae03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2
tae03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03013	Nucleocytoplasmic transport	6
sbi04120	Ubiquitin mediated proteolysis	2
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03040	Spliceosome	8

Expression

Expression pattern

Entrez Gene ID^*

100794371

100804954

25486489

18100352

815177

103860352

100252478

107929933

107932237

106439774

106418336

102612227

101255810

102601563

107779418

107811023

4343217

103631951

103646054

123138363

123145603

123404486

8060410

100836474

5717506

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100794371 (gma-u.5 coexpression data)

Top 50 enrichment test to 100794371 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100794371 (gma-u.5 coexpression data)

Top 50 enrichment test to 100794371 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**