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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255810   protein CTR9 homolog 
 sly-r.6   101255810   protein CTR9 homolog 
 sot-r.1   102601563   protein CTR9 homolog 
 nta-r.1   107779418   protein CTR9 homolog 
 nta-r.1   107811023   protein CTR9 homolog 
 ath-u.5   ELF8   binding protein 
 gma-u.5   100804954   protein CTR9 homolog 
 gma-u.5   100794371   protein CTR9 homolog 
 bra-r.6   103860352   protein CTR9 homolog 
 vvi-u.5   100252478   protein CTR9 homolog 
 ppo-u.5   18100352   protein CTR9 homolog 
 mtr-u.5   25486489   protein CTR9 homolog 
 ghi-r.1   107929933   protein CTR9 homolog 
 ghi-r.1   107932237   protein CTR9 homolog 
 bna-r.1   106418336   protein CTR9 homolog 
 bna-r.1   106439774   protein CTR9 homolog 
 cit-r.1   102612227   protein CTR9 homolog 
 osa-u.5   4343217   protein CTR9 homolog 
 zma-u.5   103646054   protein CTR9 homolog 
 zma-u.5   103631951   protein CTR9 homolog 
 tae-r.2   123145603   protein CTR9 homolog 
 tae-r.2   123138363   protein CTR9 homolog 
 tae-r.2   123128479   protein CTR9 homolog 
 hvu-r.1   123404486   protein CTR9 homolog 
 sbi-r.1   8060410   protein CTR9 homolog 
 bdi-r.1   100836474   protein CTR9 homolog 
 cre-r.1   CHLRE_03g189605v5   uncharacterized protein 

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Top 50 coexpressed genes to 101255810 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255810 (sly-u.5 coexpression data)

CoexMap"101255810"


slyLOC101255810 | Entrez gene ID : 101255810    
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 2 1 2 1 1 1 1 2 2 1 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006368 [list] [network] transcription elongation by RNA polymerase II  (21 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1608 genes)  IEA  
GO CC
GO:0016593 [list] [network] Cdc73/Paf1 complex  (7 genes)  IEA  
GO MF
GO:0000993 [list] [network] RNA polymerase II complex binding  (15 genes)  IEA  
Protein XP_004243718.1 [sequence] [blastp]
XP_069143051.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_E.R. 3  (predict for XP_004243718.1)
cyto 6,  nucl 3,  cyto_E.R. 3  (predict for XP_069143051.1)
Subcellular
localization
TargetP
other 7  (predict for XP_004243718.1)
other 7  (predict for XP_069143051.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255810
sly-r.6
for
101255810
sot-r.1
for
102601563
nta-r.1
for
107779418
nta-r.1
for
107811023
ath-u.5
for
ELF8
gma-u.5
for
100804954
gma-u.5
for
100794371
bra-r.6
for
103860352
vvi-u.5
for
100252478
ppo-u.5
for
18100352
mtr-u.5
for
25486489
ghi-r.1
for
107929933
ghi-r.1
for
107932237
bna-r.1
for
106418336
bna-r.1
for
106439774
cit-r.1
for
102612227
osa-u.5
for
4343217
zma-u.5
for
103646054
zma-u.5
for
103631951
tae-r.2
for
123145603
tae-r.2
for
123138363
tae-r.2
for
123128479
hvu-r.1
for
123404486
sbi-r.1
for
8060410
bdi-r.1
for
100836474
cre-r.1
for
CHLRE_03g189605v5


Ortholog ID: 9380
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi ghi bna bna cit osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC101255810 LOC102601563 LOC107779418 LOC107811023 ELF8 LOC100804954 LOC100794371 LOC103860352 LOC100252478 LOC18100352 LOC25486489 LOC107929933 LOC107932237 LOC106418336 LOC106439774 LOC102612227 LOC4343217 LOC103646054 LOC103631951 LOC123145603 LOC123138363 LOC123128479 LOC123404486 LOC8060410 LOC100836474 CHLRE_03g189605v5
Function* protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog binding protein protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog protein CTR9 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03040 Spliceosome 2
nta03440 Homologous recombination 2
nta03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03015 mRNA surveillance pathway 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03250 Viral life cycle - HIV-1 5
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 3
tae03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 6
sbi04120 Ubiquitin mediated proteolysis 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 3
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101255810 102601563 107779418 107811023 815177 100804954 100794371 103860352 100252478 18100352 25486489 107929933 107932237 106418336 106439774 102612227 4343217 103646054 103631951 123145603 123138363 123128479 123404486 8060410 100836474 5717506
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