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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100794695   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 gma-r.7   100794695   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 gma-m.5   100794695   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 gma-u.5   100778991   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 mtr-u.5   11421148   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 mtr-u.5   11420621   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 ppo-u.5   7481408   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 ppo-u.5   7495210   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 ath-u.5   GUN1   s uncoupled 1 
 vvi-u.5   100255579   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 sly-u.5   101265032   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 osa-u.5   4352523   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 zma-u.5   103639469   pentatricopeptide repeat-containing protein, chloroplastic-like 

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Top 50 coexpressed genes to 100794695 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100794695 (gma-u.5 coexpression data)

CoexMap"100794695"


gmaLOC100794695 | Entrez gene ID : 100794695      
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 4 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (8 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (10 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003531893.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_003531893.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003531893.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100794695
gma-r.7
for
100794695
gma-m.5
for
100794695
gma-u.5
for
100778991
mtr-u.5
for
11421148
mtr-u.5
for
11420621
ppo-u.5
for
7481408
ppo-u.5
for
7495210
ath-u.5
for
GUN1
vvi-u.5
for
100255579
sly-u.5
for
101265032
osa-u.5
for
4352523
zma-u.5
for
103639469


Ortholog ID: 6820
Species gma gma mtr mtr ppo ppo ath bra bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100794695 LOC100778991 LOC11420621 LOC11421148 LOC7495210 LOC7481408 GUN1 LOC103865140 LOC103867877 LOC100255579 LOC107946005 LOC107912309 LOC106379787 LOC125608271 LOC102611354 LOC101265032 LOC102602193 LOC107801966 LOC107764668 LOC4352523 LOC103639469 LOC123110734 LOC123102547 LOC123399971 LOC8068842 LOC100822908
Function* pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic s uncoupled 1 pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00460 Cyanoamino acid metabolism 3
bna00500 Starch and sucrose metabolism 3
bna00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
sot00785 Lipoic acid metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04146 Peroxisome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 5
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100794695 100778991 11420621 11421148 7495210 7481408 817698 103865140 103867877 100255579 107946005 107912309 106379787 125608271 102611354 101265032 102602193 107801966 107764668 4352523 103639469 123110734 123102547 123399971 8068842 100822908
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