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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7495210   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 ppo-r.4   7495210   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 ppo-m.4   7495210   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 ppo-u.5   7481408   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 gma-u.5   100794695   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 gma-u.5   100778991   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 mtr-u.5   11421148   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 mtr-u.5   11420621   pentatricopeptide repeat-containing protein At2g31400, chloroplastic 
 ath-u.5   GUN1   s uncoupled 1 
 vvi-u.5   100255579   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 sly-u.5   101265032   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 osa-u.5   4352523   pentatricopeptide repeat-containing protein GUN1, chloroplastic 
 zma-u.5   103639469   pentatricopeptide repeat-containing protein, chloroplastic-like 

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Top 50 coexpressed genes to 7495210 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7495210 (ppo-u.5 coexpression data)

CoexMap"7495210"


ppoLOC7495210 | Entrez gene ID : 7495210    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 2 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002320970.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_002320970.4)
Subcellular
localization
TargetP
chlo 7,  other 5  (predict for XP_002320970.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7495210

.
ppo-r.4
for
7495210

.
ppo-m.4
for
7495210

.
ppo-u.5
for
7481408

.
gma-u.5
for
100794695

.
gma-u.5
for
100778991

.
mtr-u.5
for
11421148

.
mtr-u.5
for
11420621

.
ath-u.5
for
GUN1

.
vvi-u.5
for
100255579

.
sly-u.5
for
101265032

.
osa-u.5
for
4352523

.
zma-u.5
for
103639469

.


Ortholog ID: 6820
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol GUN1 LOC100794695 LOC100778991 LOC101265032 LOC4352523 LOC103639469 LOC103865140 LOC103867877 LOC100255579 LOC7495210 LOC7481408 LOC11420621 LOC11421148 LOC123110734 LOC123102547 LOC123399971 LOC107946005 LOC107912309 LOC106379787 LOC125608271 LOC8068842 LOC102602193 LOC102611354 LOC100822908 LOC107801966 LOC107764668
Function* s uncoupled 1 pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic pentatricopeptide repeat-containing protein At2g31400, chloroplastic pentatricopeptide repeat-containing protein GUN1, chloroplastic-like pentatricopeptide repeat-containing protein GUN1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 2
gma04075 Plant hormone signal transduction 2
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
osa00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 5
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00460 Cyanoamino acid metabolism 3
bna00500 Starch and sucrose metabolism 3
bna00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00020 Citrate cycle (TCA cycle) 2
sot00620 Pyruvate metabolism 2
sot00785 Lipoic acid metabolism 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04146 Peroxisome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817698 100794695 100778991 101265032 4352523 103639469 103865140 103867877 100255579 7495210 7481408 11420621 11421148 123110734 123102547 123399971 107946005 107912309 106379787 125608271 8068842 102602193 102611354 100822908 107801966 107764668
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