Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100798734  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 gma-r.7  100798734  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 mtr-u.5  11421785  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 ppo-u.5  7463661  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 ath-u.5  AT3G22150  Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5  100256920  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 sly-u.5  104644275  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 
 osa-u.5  4336891  pentatricopeptide repeat-containing protein At3g22150, chloroplastic 

close


Top 50 coexpressed genes to 100798734 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100798734 (gma-u.5 coexpression data)

CoexMap"100798734"


gmaLOC100798734 | Entrez gene ID : 100798734
Species gma mtr ppo ath vvi sly osa hvu sot tae nta bra cit ghi zma bna bdi sbi cre
Paralog 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_014622387.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_014622387.2)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for XP_014622387.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100798734

.

gma-r.7
for
100798734

.

mtr-u.5
for
11421785

.

ppo-u.5
for
7463661

.

ath-u.5
for
AT3G22150

.

vvi-u.5
for
100256920

.

sly-u.5
for
104644275

.

osa-u.5
for
4336891

.


Ortholog ID: 11961
Species ath gma sly osa bra vvi ppo mtr tae tae hvu ghi ghi bna sbi sot cit bdi nta nta
Symbol AT3G22150 LOC100798734 LOC104644275 LOC4336891 LOC103849794 LOC100256920 LOC7463661 LOC11421785 LOC123190280 LOC123054397 LOC123427710 LOC107954753 LOC107952838 LOC106439812 LOC8063926 LOC102578445 LOC102628643 LOC100832407 LOC107769861 LOC107813223
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic-like pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic pentatricopeptide repeat-containing protein At3g22150, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu00860 Porphyrin metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821779 100798734 104644275 4336891 103849794 100256920 7463661 11421785 123190280 123054397 123427710 107954753 107952838 106439812 8063926 102578445 102628643 100832407 107769861 107813223
The preparation time of this page was 0.2 [sec].