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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100800457   spliceosome-associated protein 130 A 
 gma-r.7   100800457   spliceosome-associated protein 130 A 
 gma-m.5   100800457   spliceosome-associated protein 130 A 
 gma-u.5   100775785   spliceosome-associated protein 130 A 
 mtr-u.5   11442895   spliceosome-associated protein 130 A 
 mtr-u.5   25485734   spliceosome-associated protein 130 A 
 mtr-u.5   11444450   spliceosome-associated protein 130 A 
 ppo-u.5   7458613   spliceosome-associated protein 130 A 
 ppo-u.5   7457908   spliceosome-associated protein 130 A 
 ath-u.5   SAP130a   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 
 ath-u.5   SAP130b   Cleavage and polyadenylation specificity factor (CPSF) A subunit protein 
 vvi-u.5   100255210   spliceosome-associated protein 130 A 
 sly-u.5   101266504   spliceosome-associated protein 130 A 
 osa-u.5   4328237   spliceosome-associated protein 130 A 
 zma-u.5   100272422   uncharacterized LOC100272422 

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Top 50 coexpressed genes to 100800457 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100800457 (gma-u.5 coexpression data)

CoexMap"100800457"


gmaLOC100800457 | Entrez gene ID : 100800457    
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 2 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0005686 [list] [network] U2 snRNP  (43 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0030620 [list] [network] U2 snRNA binding  (8 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003556541.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 9,  chlo 1,  nucl 1  (predict for XP_003556541.1)
Subcellular
localization
TargetP
mito 3,  other 3  (predict for XP_003556541.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100800457
gma-r.7
for
100800457
gma-m.5
for
100800457
gma-u.5
for
100775785
mtr-u.5
for
11442895
mtr-u.5
for
25485734
mtr-u.5
for
11444450
ppo-u.5
for
7458613
ppo-u.5
for
7457908
ath-u.5
for
SAP130a
ath-u.5
for
SAP130b
vvi-u.5
for
100255210
sly-u.5
for
101266504
osa-u.5
for
4328237
zma-u.5
for
100272422


Ortholog ID: 7253
Species gma gma mtr mtr ppo ppo ath ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100775785 LOC100800457 LOC25485734 LOC11442895 LOC7458613 LOC7457908 SAP130a SAP130b LOC103847020 LOC100255210 LOC107926073 LOC107959892 LOC106352352 LOC106433276 LOC102619030 LOC101266504 LOC102606375 LOC107780494 LOC107779569 LOC4328237 LOC100272422 LOC123143694 LOC123136182 LOC123404214 LOC8057539 LOC100843379 CHLRE_08g372800v5
Function* spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A Cleavage and polyadenylation specificity factor (CPSF) A subunit protein Cleavage and polyadenylation specificity factor (CPSF) A subunit protein spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A-like spliceosome-associated protein 130 A spliceosome-associated protein 130 A splicing factor 3B subunit 3-like spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A uncharacterized LOC100272422 spliceosome-associated protein 130 A spliceosome-associated protein 130 A spliceosome-associated protein 130 A-like spliceosome-associated protein 130 A spliceosome-associated protein 130 A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03013 Nucleocytoplasmic transport 4
gma00220 Arginine biosynthesis 2
gma00240 Pyrimidine metabolism 2
gma00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
mtr00270 Cysteine and methionine metabolism 2
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
ath03013 Nucleocytoplasmic transport 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 Nucleocytoplasmic transport 2
ath03082 ATP-dependent chromatin remodeling 2
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03440 Homologous recombination 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi03030 DNA replication 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 14
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03013 Nucleocytoplasmic transport 2
cit03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 3
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 3
nta00240 Pyrimidine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 14
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 12
tae03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 4
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 11
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100775785 100800457 25485734 11442895 7458613 7457908 824686 824688 103847020 100255210 107926073 107959892 106352352 106433276 102619030 101266504 102606375 107780494 107779569 4328237 100272422 123143694 123136182 123404214 8057539 100843379 5726872
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