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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100800903   U1 small nuclear ribonucleoprotein 70 kDa 
 gma-r.7   100800903   U1 small nuclear ribonucleoprotein 70 kDa 
 gma-m.5   100800903   U1 small nuclear ribonucleoprotein 70 kDa 
 gma-u.5   100814484   U1 small nuclear ribonucleoprotein 70 kDa 
 mtr-u.5   11405190   U1 small nuclear ribonucleoprotein 70 kDa 
 ppo-u.5   18099289   U1 small nuclear ribonucleoprotein 70 kDa 
 ppo-u.5   7473166   U1 small nuclear ribonucleoprotein 70 kDa 
 ath-u.5   U1-70K   U1 small nuclear ribonucleoprotein-70K 
 vvi-u.5   100244445   U1 small nuclear ribonucleoprotein 70 kDa 
 sly-u.5   101254653   U1 small nuclear ribonucleoprotein 70 kDa 
 osa-u.5   4347985   U1 small nuclear ribonucleoprotein 70 kDa 
 zma-u.5   542179   U1 snRNP 

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Top 50 coexpressed genes to 100800903 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100800903 (gma-u.5 coexpression data)

CoexMap"100800903"


gmaLOC100800903 | Entrez gene ID : 100800903    
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03040 [list] [network] Spliceosome (466 genes)
GO BP
GO:0000398 [list] [network] mRNA splicing, via spliceosome  (282 genes)  IEA  
GO CC
GO:0071004 [list] [network] U2-type prespliceosome  (34 genes)  IEA  
GO:0005685 [list] [network] U1 snRNP  (39 genes)  IEA  
GO:0071011 [list] [network] precatalytic spliceosome  (62 genes)  IEA  
GO MF
GO:0030619 [list] [network] U1 snRNA binding  (10 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003517230.1 [sequence] [blastp]
XP_006573582.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto 1  (predict for XP_003517230.1)
nucl 9,  cyto 1  (predict for XP_006573582.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_003517230.1)
chlo 6,  other 4  (predict for XP_006573582.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100800903
gma-r.7
for
100800903
gma-m.5
for
100800903
gma-u.5
for
100814484
mtr-u.5
for
11405190
ppo-u.5
for
18099289
ppo-u.5
for
7473166
ath-u.5
for
U1-70K
vvi-u.5
for
100244445
sly-u.5
for
101254653
osa-u.5
for
4347985
zma-u.5
for
542179


Ortholog ID: 6898
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna cit sly sot nta nta osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC100800903 LOC100814484 LOC11405190 LOC7473166 LOC18099289 U1-70K LOC103837710 LOC100244445 LOC107914294 LOC107900632 LOC111211820 LOC102622406 LOC101254653 LOC102601882 LOC107759222 LOC107792003 LOC4347985 LOC542179 LOC123042116 LOC123125080 LOC123434007 LOC123427951 LOC8083888 LOC8084932 LOC100845610 LOC100822879 CHLRE_16g656250v5
Function* U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein-70K U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 snRNP U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa-like U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa U1 small nuclear ribonucleoprotein 70 kDa uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 7
gma03013 Nucleocytoplasmic transport 3
gma03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 8
gma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 9
mtr03015 mRNA surveillance pathway 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 6
ppo03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 10
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 4
bna03015 mRNA surveillance pathway 4
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
cit03013 Nucleocytoplasmic transport 4
cit03015 mRNA surveillance pathway 3
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03013 Nucleocytoplasmic transport 2
nta03015 mRNA surveillance pathway 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae00071 Fatty acid degradation 2
tae00592 alpha-Linolenic acid metabolism 2
tae01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 14
cre03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100800903 100814484 11405190 7473166 18099289 824230 103837710 100244445 107914294 107900632 111211820 102622406 101254653 102601882 107759222 107792003 4347985 542179 123042116 123125080 123434007 123427951 8083888 8084932 100845610 100822879 5723388
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