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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5  100801345  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 gma-r.7  100801345  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 gma-u.5  100802087  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 mtr-u.5  25488566  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 mtr-u.5  25488565  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 ppo-u.5  7460274  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 ath-u.5  CRR22  Pentatricopeptide repeat (PPR) superfamily protein 
 vvi-u.5  100262586  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 sly-u.5  101265612  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 osa-u.5  4339896  pentatricopeptide repeat-containing protein At1g11290, chloroplastic 
 zma-u.5  114574132  uncharacterized LOC114574132 

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Top 50 coexpressed genes to 100801345 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100801345 (gma-u.5 coexpression data)

CoexMap"100801345"


gmaLOC100801345 | Entrez gene ID : 100801345
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 2 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003523921.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  plas 1,  E.R. 1,  E.R._plas 1  (predict for XP_003523921.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_003523921.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

gma-u.5
for
100801345


gma-r.7
for
100801345


gma-u.5
for
100802087


mtr-u.5
for
25488566


mtr-u.5
for
25488565


ppo-u.5
for
7460274


ath-u.5
for
CRR22


vvi-u.5
for
100262586


sly-u.5
for
101265612


osa-u.5
for
4339896


zma-u.5
for
114574132



Ortholog ID: 10446
Species gma gma mtr mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC100802087 LOC100801345 LOC25488565 LOC25488566 LOC7460274 CRR22 LOC103842182 LOC100262586 LOC107955338 LOC121230788 LOC106368558 LOC106413393 LOC102608598 LOC101265612 LOC102602259 LOC107808045 LOC107823769 LOC4339896 LOC114574132 LOC123164958 LOC123148580 LOC123407987 LOC8079679 LOC100832210
Function* pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like pentatricopeptide repeat-containing protein At1g11290, chloroplastic uncharacterized LOC114574132 pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic pentatricopeptide repeat-containing protein At1g11290, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100802087 100801345 25488565 25488566 7460274 837671 103842182 100262586 107955338 121230788 106368558 106413393 102608598 101265612 102602259 107808045 107823769 4339896 114574132 123164958 123148580 123407987 8079679 100832210
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