ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106413393	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
bna-r.1	106368558	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
bra-r.6	103842182	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
ath-u.5	CRR22	Pentatricopeptide repeat (PPR) superfamily protein
ghi-r.1	121230788	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
ghi-r.1	107955338	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
cit-r.1	102608598	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
gma-u.5	100802087	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
gma-u.5	100801345	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
vvi-u.5	100262586	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
ppo-u.5	7460274	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
mtr-u.5	25488566	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
mtr-u.5	25488565	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
sly-u.5	101265612	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
sot-r.1	102602259	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
nta-r.1	107823769	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
nta-r.1	107808045	pentatricopeptide repeat-containing protein At1g11290, chloroplastic-like
osa-u.5	4339896	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
zma-u.5	114574132	uncharacterized LOC114574132
tae-r.2	123148580	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
tae-r.2	123088232	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
tae-r.2	123164958	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
hvu-r.1	123407987	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
sbi-r.1	8079679	pentatricopeptide repeat-containing protein At1g11290, chloroplastic
bdi-r.1	100832210	pentatricopeptide repeat-containing protein At1g11290, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(870 genes)

IEA

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(3493 genes)	IEA
GO:0003723 [list] [network] RNA binding	(3852 genes)	IEA
GO:0005515 [list] [network] protein binding	(12789 genes)	IEA

Protein

XP_022564521.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, nucl 1, extr 1

(predict for XP_022564521.2)

Subcellular
localization
TargetP

chlo 6

(predict for XP_022564521.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106413393	bna-r.1 for 106368558	bra-r.6 for 103842182	ath-u.5 for CRR22	ghi-r.1 for 121230788	ghi-r.1 for 107955338	cit-r.1 for 102608598	gma-u.5 for 100802087	gma-u.5 for 100801345	vvi-u.5 for 100262586	ppo-u.5 for 7460274	mtr-u.5 for 25488566	mtr-u.5 for 25488565	sly-u.5 for 101265612	sot-r.1 for 102602259	nta-r.1 for 107823769	nta-r.1 for 107808045	osa-u.5 for 4339896	zma-u.5 for 114574132	tae-r.2 for 123148580	tae-r.2 for 123088232	tae-r.2 for 123164958	hvu-r.1 for 123407987	sbi-r.1 for 8079679	bdi-r.1 for 100832210