ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100811292	DNA-directed RNA polymerase III subunit 1
gma-r.7	100811292	DNA-directed RNA polymerase III subunit 1
gma-m.5	100811292	DNA-directed RNA polymerase III subunit 1
mtr-u.5	11412126	DNA-directed RNA polymerase III subunit 1
mtr-u.5	11410173	DNA-directed RNA polymerase III subunit 1
ppo-u.5	7467656	DNA-directed RNA polymerase III subunit 1
ath-u.5	NRPC1	nuclear RNA polymerase C1
vvi-u.5	100267354	DNA-directed RNA polymerase III subunit 1
sly-u.5	101265201	DNA-directed RNA polymerase III subunit 1
osa-u.5	4336254	DNA-directed RNA polymerase III subunit 1
zma-u.5	103646285	DNA-directed RNA polymerase III subunit 1

functional annotation

KEGG

gmx03020 [list] [network] RNA polymerase (81 genes)

GO BP

GO:0006351 [list] [network] DNA-templated transcription

(402 genes)

IEA

GO CC

GO MF

GO:0003899 [list] [network] DNA-directed RNA polymerase activity	(11 genes)	IEA
GO:0003677 [list] [network] DNA binding	(3517 genes)	IEA

Protein

XP_003539102.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, chlo 2, cysk_nucl 2, nucl_plas 2

(predict for XP_003539102.1)

Subcellular
localization
TargetP

other 8

(predict for XP_003539102.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100811292	gma-r.7 for 100811292	gma-m.5 for 100811292	mtr-u.5 for 11412126	mtr-u.5 for 11410173	ppo-u.5 for 7467656	ath-u.5 for NRPC1	vvi-u.5 for 100267354	sly-u.5 for 101265201	osa-u.5 for 4336254	zma-u.5 for 103646285

Ortholog ID: 7388

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

NRPC1

Function^*

DNA-directed RNA polymerase III subunit 1

nuclear RNA polymerase C1

DNA-directed RNA polymerase III subunit 1

uncharacterized LOC123430162

DNA-directed RNA polymerase III subunit 1-like

DNA-directed RNA polymerase III subunit 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03008	Ribosome biogenesis in eukaryotes	2
gma03083	Polycomb repressive complex	2
gma03082	ATP-dependent chromatin remodeling	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4
mtr03020	RNA polymerase	3
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	4
mtr03008	Ribosome biogenesis in eukaryotes	3
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03013	Nucleocytoplasmic transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03013	Nucleocytoplasmic transport	3
ath03008	Ribosome biogenesis in eukaryotes	2
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2
vvi03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	6
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03020	RNA polymerase	6
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	7
bna03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	2
cit03018	RNA degradation	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	6
sly03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03020	RNA polymerase	2
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9
nta03040	Spliceosome	4
nta03020	RNA polymerase	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	9
nta03040	Spliceosome	4
nta03020	RNA polymerase	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	5
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	6
tae03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	3
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	5
bdi03020	RNA polymerase	3
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

100811292

11412126

11410173

7467656

836126

103851524

100267354

107885964

107950310

106350139

106385775

102611247

101265201

102603938

107790357

107797308

4336254

103646285

123080466

123180660

123430162

123401078

8073709

100846820

100830443

5729031

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100811292 (gma-u.5 coexpression data)

Top 50 enrichment test to 100811292 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	hvu	bna	cit	bra	ghi	sbi	bdi	nta	tae	cre	sot
Paralog	3	2	1	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100811292 (gma-u.5 coexpression data)

Top 50 enrichment test to 100811292 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**