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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7467656   DNA-directed RNA polymerase III subunit 1 
 ppo-r.4   7467656   DNA-directed RNA polymerase III subunit 1 
 gma-u.5   100811292   DNA-directed RNA polymerase III subunit 1 
 mtr-u.5   11410173   DNA-directed RNA polymerase III subunit 1 
 mtr-u.5   11412126   DNA-directed RNA polymerase III subunit 1 
 ath-u.5   NRPC1   nuclear RNA polymerase C1 
 vvi-u.5   100267354   DNA-directed RNA polymerase III subunit 1 
 sly-u.5   101265201   DNA-directed RNA polymerase III subunit 1 
 osa-u.5   4336254   DNA-directed RNA polymerase III subunit 1 
 zma-u.5   103646285   DNA-directed RNA polymerase III subunit 1 

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Top 50 coexpressed genes to 7467656 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7467656 (ppo-u.5 coexpression data)

CoexMap"7467656"


ppoLOC7467656 | Entrez gene ID : 7467656    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03020 [list] [network] RNA polymerase (53 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (264 genes)  IEA  
GO CC
GO MF
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (35 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_052310412.1 [sequence] [blastp]
XP_052310413.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 1,  cyto 1,  plas 1,  vacu 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for XP_052310412.1)
cyto 5,  nucl 2,  plas 1,  vacu 1,  E.R. 1,  pero 1,  E.R._vacu 1,  E.R._plas 1  (predict for XP_052310413.1)
Subcellular
localization
TargetP
other 8  (predict for XP_052310412.1)
other 7  (predict for XP_052310413.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7467656

.
ppo-r.4
for
7467656

.
gma-u.5
for
100811292

.
mtr-u.5
for
11410173

.
mtr-u.5
for
11412126

.
ath-u.5
for
NRPC1

.
vvi-u.5
for
100267354

.
sly-u.5
for
101265201

.
osa-u.5
for
4336254

.
zma-u.5
for
103646285

.


Ortholog ID: 7388
Species ath gma sly osa zma bra vvi ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit bdi bdi nta nta
Symbol NRPC1 LOC100811292 LOC101265201 LOC4336254 LOC103646285 LOC103851524 LOC100267354 LOC7467656 LOC11412126 LOC11410173 LOC123080466 LOC123180660 LOC123430162 LOC123401078 LOC107885964 LOC107950310 LOC106350139 LOC106385775 CHLRE_03g165750v5 LOC8073709 LOC102603938 LOC102611247 LOC100846820 LOC100830443 LOC107790357 LOC107797308
Function* nuclear RNA polymerase C1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 uncharacterized LOC123430162 DNA-directed RNA polymerase III subunit 1-like DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 uncharacterized protein DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1 DNA-directed RNA polymerase III subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
ath03008 Ribosome biogenesis in eukaryotes 2
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03008 Ribosome biogenesis in eukaryotes 2
gma03083 Polycomb repressive complex 2
gma03082 ATP-dependent chromatin remodeling 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 5
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03020 RNA polymerase 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 4
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 7
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 2
cit03018 RNA degradation 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 5
bdi03020 RNA polymerase 3
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta03040 Spliceosome 4
nta03020 RNA polymerase 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836126 100811292 101265201 4336254 103646285 103851524 100267354 7467656 11412126 11410173 123080466 123180660 123430162 123401078 107885964 107950310 106350139 106385775 5729031 8073709 102603938 102611247 100846820 100830443 107790357 107797308
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