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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100812823   beta-D-xylosidase 1 
 gma-r.7   100812823   beta-D-xylosidase 1 
 gma-u.5   100778624   probable beta-D-xylosidase 2 
 gma-u.5   100798630   probable beta-D-xylosidase 2 
 gma-u.5   100805839   beta-D-xylosidase 1 
 mtr-u.5   11407644   probable beta-D-xylosidase 2 
 mtr-u.5   11412498   beta-D-xylosidase 1 
 mtr-u.5   11430018   probable beta-D-xylosidase 2 
 ppo-u.5   7491265   probable beta-D-xylosidase 2 
 ppo-u.5   7471119   putative beta-D-xylosidase 
 ppo-u.5   7482262   putative beta-D-xylosidase 
 ath-u.5   BXL1   beta-xylosidase 1 
 ath-u.5   BXL2   beta-xylosidase 2 
 vvi-u.5   100252178   probable beta-D-xylosidase 2 
 vvi-u.5   100249978   putative beta-D-xylosidase 
 sly-u.5   Arf/Xyl1   alpha-L-arabinofuranosidase/beta-xylosidase 
 sly-u.5   Arf/Xyl2   alpha-L-arabinofuranosidase/beta-xylosidase 
 osa-u.5   4351103   probable beta-D-xylosidase 2 
 zma-u.5   100279508   uncharacterized LOC100279508 

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Top 50 coexpressed genes to 100812823 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100812823 (gma-u.5 coexpression data)

CoexMap"100812823"


gmaLOC100812823 | Entrez gene ID : 100812823      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 3 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (15 genes)  IEA  
GO:0045493 [list] [network] xylan catabolic process  (15 genes)  IEA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (121 genes)  IEA  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (15 genes)  IEA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (25 genes)  IEA  
Protein XP_003533205.4 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  vacu 2,  E.R. 1  (predict for XP_003533205.4)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003533205.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100812823
gma-r.7
for
100812823
gma-u.5
for
100778624
gma-u.5
for
100798630
gma-u.5
for
100805839
mtr-u.5
for
11407644
mtr-u.5
for
11412498
mtr-u.5
for
11430018
ppo-u.5
for
7491265
ppo-u.5
for
7471119
ppo-u.5
for
7482262
ath-u.5
for
BXL1
ath-u.5
for
BXL2
vvi-u.5
for
100252178
vvi-u.5
for
100249978
sly-u.5
for
Arf/Xyl1
sly-u.5
for
Arf/Xyl2
osa-u.5
for
4351103
zma-u.5
for
100279508


Ortholog ID: 3153
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit cit sly sly sot sot nta nta osa zma tae tae sbi bdi
Symbol LOC100812823 LOC100809501 LOC11412498 LOC11407644 LOC7471119 LOC7460449 BXL2 BXL1 LOC103854592 LOC103874626 LOC100252178 LOC100249978 LOC107896612 LOC107946033 LOC106348810 LOC106401837 LOC102627794 LOC102625511 Arf/Xyl1 Arf/Xyl2 LOC102606442 LOC102603514 LOC107818832 LOC107781973 LOC4351103 LOC100279508 LOC123096840 LOC123086223 LOC8070217 LOC100829091
Function* beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 putative beta-D-xylosidase probable beta-D-xylosidase 2 beta-xylosidase 2 beta-xylosidase 1 beta-D-xylosidase 1 beta-D-xylosidase 1 probable beta-D-xylosidase 2 putative beta-D-xylosidase beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2 alpha-L-arabinofuranosidase/beta-xylosidase alpha-L-arabinofuranosidase/beta-xylosidase beta-D-xylosidase 1 probable beta-D-xylosidase 2 beta-D-xylosidase 1 putative beta-D-xylosidase 2 probable beta-D-xylosidase 2 uncharacterized LOC100279508 probable beta-D-xylosidase 2 probable beta-D-xylosidase 2 beta-D-xylosidase 1 probable beta-D-xylosidase 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00591 Linoleic acid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 4
mtr00561 Glycerolipid metabolism 3
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 3
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00908 Zeatin biosynthesis 2
bra00910 Nitrogen metabolism 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna01200 Carbon metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00280 Valine, leucine and isoleucine degradation 5
nta00250 Alanine, aspartate and glutamate metabolism 3
nta00270 Cysteine and methionine metabolism 3
nta01200 Carbon metabolism 3
nta01210 2-Oxocarboxylic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 6
tae00941 Flavonoid biosynthesis 3
tae00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 3
tae00260 Glycine, serine and threonine metabolism 3
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100812823 100809501 11412498 11407644 7471119 7460449 837940 834996 103854592 103874626 100252178 100249978 107896612 107946033 106348810 106401837 102627794 102625511 101055558 101055559 102606442 102603514 107818832 107781973 4351103 100279508 123096840 123086223 8070217 100829091
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