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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816727   uncharacterized LOC100816727 
 gma-r.7   100816727   uncharacterized LOC100816727 
 gma-u.5   100527229   uncharacterized LOC100527229 
 mtr-u.5   11436168   DNA-directed RNA polymerase I subunit rpa43 
 ppo-u.5   7493952   uncharacterized LOC7493952 
 ppo-u.5   7490660   DNA-directed RNA polymerase I subunit rpa43 
 ath-u.5   AT1G75670   DNA-directed RNA polymerase 
 vvi-u.5   100264366   uncharacterized LOC100264366 
 sly-u.5   101248579   uncharacterized LOC101248579 
 osa-u.5   4340256   DNA-directed RNA polymerase I subunit rpa43 
 osa-u.5   4352407   DNA-directed RNA polymerase I subunit rpa43 
 zma-u.5   100276818   uncharacterized LOC100276818 

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Top 50 coexpressed genes to 100816727 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816727 (gma-u.5 coexpression data)

CoexMap"100816727"


gmaLOC100816727 | Entrez gene ID : 100816727      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006352 [list] [network] DNA-templated transcription initiation  (123 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (27 genes)  IEA  
GO MF
Protein XP_003534490.1 [sequence] [blastp]
XP_006587794.1 [sequence] [blastp]
XP_006587795.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 2,  cyto 1  (predict for XP_003534490.1)
chlo 6,  mito 2,  cyto 1  (predict for XP_006587794.1)
chlo 6,  mito 2,  cyto 1  (predict for XP_006587795.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003534490.1)
other 7  (predict for XP_006587794.1)
other 7  (predict for XP_006587795.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816727

.
gma-r.7
for
100816727

.
gma-u.5
for
100527229

.
mtr-u.5
for
11436168

.
ppo-u.5
for
7493952

.
ppo-u.5
for
7490660

.
ath-u.5
for
AT1G75670

.
vvi-u.5
for
100264366

.
sly-u.5
for
101248579

.
osa-u.5
for
4340256

.
osa-u.5
for
4352407

.
zma-u.5
for
100276818

.


Ortholog ID: 7857
Species ath gma gma sly osa osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G75670 LOC100816727 LOC100527229 LOC101248579 LOC4340256 LOC4352407 LOC100276818 LOC103852969 LOC100264366 LOC7493952 LOC7490660 LOC11436168 LOC123121053 LOC123103431 LOC123397765 LOC107955492 LOC107955495 BNAA02G17360D LOC106390980 CHLRE_02g086750v5 LOC8064632 LOC102591771 LOC102620892 LOC100831354 LOC107801865 LOC107798310
Function* DNA-directed RNA polymerase uncharacterized LOC100816727 uncharacterized LOC100527229 uncharacterized LOC101248579 DNA-directed RNA polymerase I subunit rpa43 DNA-directed RNA polymerase I subunit rpa43 uncharacterized LOC100276818 uncharacterized LOC103852969 uncharacterized LOC100264366 uncharacterized LOC7493952 DNA-directed RNA polymerase I subunit rpa43 DNA-directed RNA polymerase I subunit rpa43 uncharacterized LOC123121053 uncharacterized LOC123103431 uncharacterized LOC123397765 uncharacterized LOC107955492 uncharacterized LOC107955495 uncharacterized BNAA02G17360D uncharacterized LOC106390980 uncharacterized protein uncharacterized LOC8064632 uncharacterized LOC102591771 uncharacterized LOC102620892 DNA-directed RNA polymerase I subunit rpa43 uncharacterized LOC107801865 uncharacterized LOC107798310
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 3
osa03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 8
vvi00230 Purine metabolism 3
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 8
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03020 RNA polymerase 2
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843901 100816727 100527229 101248579 4340256 4352407 100276818 103852969 100264366 7493952 7490660 11436168 123121053 123103431 123397765 107955492 107955495 106422393 106390980 5727406 8064632 102591771 102620892 100831354 107801865 107798310
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