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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100819319   transcription factor bHLH128 
 gma-r.7   100819319   transcription factor bHLH128 
 gma-m.5   100819319   transcription factor bHLH128 
 mtr-u.5   11440758   transcription factor bHLH128 
 ppo-u.5   7481937   transcription factor bHLH128 
 ppo-u.5   7462039   transcription factor bHLH128 
 ath-u.5   AT2G43140   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G05805   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103844093   transcription factor bHLH128 
 bra-r.6   103858051   transcription factor bHLH129 
 bra-r.6   103866699   transcription factor bHLH129 
 vvi-u.5   100246361   transcription factor bHLH128 
 ghi-r.1   107896967   transcription factor bHLH128 
 ghi-r.1   107914687   transcription factor bHLH128 
 bna-r.1   111216019   transcription factor bHLH129-like 
 bna-r.1   111205861   transcription factor bHLH129-like 
 bna-r.1   106421039   transcription factor bHLH129-like 
 cit-r.1   102626603   transcription factor bHLH128 
 sly-u.5   101263058   transcription factor bHLH128 
 sot-r.1   102585148   transcription factor bHLH128-like 
 sot-r.1   102582126   transcription factor bHLH128-like 
 nta-r.1   107808991   transcription factor bHLH128 
 nta-r.1   142168655   transcription factor bHLH128-like 
 osa-u.5   4325038   transcription factor bHLH128 
 osa-u.5   4329910   transcription factor bHLH128 
 osa-u.5   4336235   transcription factor bHLH80 
 zma-u.5   103627392   transcription factor bHLH128 
 zma-u.5   100284495   uncharacterized LOC100284495 
 tae-r.2   123062834   transcription factor bHLH128 
 tae-r.2   123080028   transcription factor bHLH128 
 hvu-r.1   123404087   transcription factor bHLH128-like 
 hvu-r.1   123445038   transcription factor bHLH128-like 
 sbi-r.1   8060174   transcription factor bHLH129 
 sbi-r.1   8072429   transcription factor bHLH80 
 sbi-r.1   8078684   transcription factor bHLH128 
 bdi-r.1   100830529   transcription factor bHLH128 
 bdi-r.1   100844967   transcription factor bHLH128 

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Top 50 coexpressed genes to 100819319 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100819319 (gma-u.5 coexpression data)

CoexMap"100819319"


gmaLOC100819319 | Entrez gene ID : 100819319      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 2 2 3 1 2 3 1 1 2 2 3 2 2 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (449 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
Protein XP_003556577.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  chlo 4  (predict for XP_003556577.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003556577.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100819319
gma-r.7
for
100819319
gma-m.5
for
100819319
mtr-u.5
for
11440758
ppo-u.5
for
7481937
ppo-u.5
for
7462039
ath-u.5
for
AT2G43140
ath-u.5
for
AT1G05805
bra-r.6
for
103844093
bra-r.6
for
103858051
bra-r.6
for
103866699
vvi-u.5
for
100246361
ghi-r.1
for
107896967
ghi-r.1
for
107914687
bna-r.1
for
111216019
bna-r.1
for
111205861
bna-r.1
for
106421039
cit-r.1
for
102626603
sly-u.5
for
101263058
sot-r.1
for
102585148
sot-r.1
for
102582126
nta-r.1
for
107808991
nta-r.1
for
142168655
osa-u.5
for
4325038
osa-u.5
for
4329910
osa-u.5
for
4336235
zma-u.5
for
103627392
zma-u.5
for
100284495
tae-r.2
for
123062834
tae-r.2
for
123080028
hvu-r.1
for
123404087
hvu-r.1
for
123445038
sbi-r.1
for
8060174
sbi-r.1
for
8072429
sbi-r.1
for
8078684
bdi-r.1
for
100830529
bdi-r.1
for
100844967


Ortholog ID: 4059
Species gma mtr ppo ppo ath ath bra bra bra vvi ghi ghi bna bna bna cit sly sot sot nta nta osa osa osa zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC100819319 LOC11440758 LOC7481937 LOC7462039 AT2G43140 AT1G05805 LOC103858051 LOC103866699 LOC103866048 LOC100246361 LOC107896967 LOC107914687 LOC106421039 LOC106371163 LOC106392365 LOC102626603 LOC101263058 LOC102585148 LOC102582126 LOC107808991 LOC142168655 LOC4325038 LOC4329910 LOC4336235 LOC103627392 LOC100284495 LOC123062834 LOC123144745 LOC123127639 LOC123404087 LOC123445038 LOC8060174 LOC8072429 LOC8078684 LOC100830529 LOC100844967
Function* transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH129 transcription factor bHLH129 transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH129-like transcription factor bHLH128 transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH80 transcription factor bHLH128 uncharacterized LOC100284495 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like transcription factor bHLH129 transcription factor bHLH80 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 4
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 8
mtr04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 8
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 5
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 5
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 10
nta04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 11
nta04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 3
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 5
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 2
sbi00030 Pentose phosphate pathway 2
sbi00480 Glutathione metabolism 2
sbi01200 Carbon metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819319 11440758 7481937 7462039 818916 837090 103858051 103866699 103866048 100246361 107896967 107914687 106421039 106371163 106392365 102626603 101263058 102585148 102582126 107808991 142168655 4325038 4329910 4336235 103627392 100284495 123062834 123144745 123127639 123404087 123445038 8060174 8072429 8078684 100830529 100844967
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