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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107808991   transcription factor bHLH128 
 sly-u.5   101263058   transcription factor bHLH128 
 ath-u.5   AT2G43140   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G05805   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100819319   transcription factor bHLH128 
 vvi-u.5   100246361   transcription factor bHLH128 
 ppo-u.5   7481937   transcription factor bHLH128 
 ppo-u.5   7462039   transcription factor bHLH128 
 mtr-u.5   11440758   transcription factor bHLH128 
 osa-u.5   4329910   transcription factor bHLH128 
 osa-u.5   4336235   transcription factor bHLH80 
 osa-u.5   4325038   transcription factor bHLH128 
 zma-u.5   103627392   transcription factor bHLH128 
 zma-u.5   100284495   uncharacterized LOC100284495 

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Top 50 coexpressed genes to 107808991 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107808991 (nta-r.1 coexpression data)

CoexMap"107808991"


ntaLOC107808991 | Entrez gene ID : 107808991      
Species nta sly ath gma vvi ppo mtr osa zma hvu bna cit bra ghi sbi bdi tae cre sot
Paralog 1 1 2 1 1 2 1 3 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (712 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (4980 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (297 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (394 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1129 genes)  IEA  
Protein XP_016489052.1 [sequence] [blastp]
XP_016489054.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_016489052.1)
nucl 9  (predict for XP_016489054.1)
Subcellular
localization
TargetP
chlo 4,  other 3  (predict for XP_016489052.1)
chlo 4,  other 3  (predict for XP_016489054.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107808991
sly-u.5
for
101263058
ath-u.5
for
AT2G43140
ath-u.5
for
AT1G05805
gma-u.5
for
100819319
vvi-u.5
for
100246361
ppo-u.5
for
7481937
ppo-u.5
for
7462039
mtr-u.5
for
11440758
osa-u.5
for
4329910
osa-u.5
for
4336235
osa-u.5
for
4325038
zma-u.5
for
103627392
zma-u.5
for
100284495


Ortholog ID: 4059
Species nta nta sly sot sot ath ath gma bra bra vvi ppo ppo mtr ghi ghi bna bna cit osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC142168655 LOC107808991 LOC101263058 LOC102585148 LOC102582126 AT1G05805 AT2G43140 LOC100819319 LOC103866699 LOC103858051 LOC100246361 LOC7481937 LOC7462039 LOC11440758 LOC107896967 LOC107914687 LOC106392365 LOC106421039 LOC102626603 LOC4336235 LOC4325038 LOC100284495 LOC103627392 LOC123144745 LOC123062834 LOC123445038 LOC123404087 LOC8060174 LOC8078684 LOC100830529 LOC100844967
Function* transcription factor bHLH128-like transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH128 transcription factor bHLH129 transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH129 transcription factor bHLH129-like transcription factor bHLH128 transcription factor bHLH80 transcription factor bHLH128 uncharacterized LOC100284495 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 11
nta04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 10
nta04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 5
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 4
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 8
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 8
mtr04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 3
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 5
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 142168655 107808991 101263058 102585148 102582126 837090 818916 100819319 103866699 103858051 100246361 7481937 7462039 11440758 107896967 107914687 106392365 106421039 102626603 4336235 4325038 100284495 103627392 123144745 123062834 123445038 123404087 8060174 8078684 100830529 100844967
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