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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   8078684   transcription factor bHLH128 
 zma-u.5   100284495   uncharacterized LOC100284495 
 zma-u.5   103627392   transcription factor bHLH128 
 osa-u.5   4325038   transcription factor bHLH128 
 osa-u.5   4329910   transcription factor bHLH128 
 osa-u.5   4336235   transcription factor bHLH80 
 ath-u.5   AT2G43140   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   AT1G05805   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100819319   transcription factor bHLH128 
 sly-u.5   101263058   transcription factor bHLH128 
 vvi-u.5   100246361   transcription factor bHLH128 
 ppo-u.5   7462039   transcription factor bHLH128 
 ppo-u.5   7481937   transcription factor bHLH128 
 mtr-u.5   11440758   transcription factor bHLH128 

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Top 50 coexpressed genes to 8078684 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 8078684 (sbi-r.1 coexpression data)

CoexMap"8078684"


sbiLOC8078684 | Entrez gene ID : 8078684    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 2 3 2 1 1 1 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (365 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (2977 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (203 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (251 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (479 genes)  IEA  
Protein XP_002456792.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 1,  mito 1  (predict for XP_002456792.2)
Subcellular
localization
TargetP
chlo 5,  mito 4  (predict for XP_002456792.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
8078684

.
zma-u.5
for
100284495

.
zma-u.5
for
103627392

.
osa-u.5
for
4325038

.
osa-u.5
for
4329910

.
osa-u.5
for
4336235

.
ath-u.5
for
AT2G43140

.
ath-u.5
for
AT1G05805

.
gma-u.5
for
100819319

.
sly-u.5
for
101263058

.
vvi-u.5
for
100246361

.
ppo-u.5
for
7462039

.
ppo-u.5
for
7481937

.
mtr-u.5
for
11440758

.


Ortholog ID: 4059
Species ath ath gma sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT1G05805 AT2G43140 LOC100819319 LOC101263058 LOC4336235 LOC4325038 LOC100284495 LOC103627392 LOC103866699 LOC103858051 LOC100246361 LOC7481937 LOC7462039 LOC11440758 LOC123144745 LOC123062834 LOC123445038 LOC123404087 LOC107896967 LOC107914687 LOC106392365 LOC106421039 LOC8060174 LOC8078684 LOC102585148 LOC102582126 LOC102626603 LOC100830529 LOC100844967 LOC142168655 LOC107808991
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH80 transcription factor bHLH128 uncharacterized LOC100284495 transcription factor bHLH128 transcription factor bHLH129 transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH129 transcription factor bHLH129-like transcription factor bHLH129 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128-like transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128 transcription factor bHLH128-like transcription factor bHLH128
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 3
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 4
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 6
sly04075 Plant hormone signal transduction 6
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04075 Plant hormone signal transduction 3
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 8
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 4
bra04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 8
mtr04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04016 MAPK signaling pathway - plant 5
hvu04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 2
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04016 MAPK signaling pathway - plant 5
sot04075 Plant hormone signal transduction 3
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 3
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 2
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 6
bdi04626 Plant-pathogen interaction 4
bdi04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 11
nta04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 10
nta04075 Plant hormone signal transduction 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837090 818916 100819319 101263058 4336235 4325038 100284495 103627392 103866699 103858051 100246361 7481937 7462039 11440758 123144745 123062834 123445038 123404087 107896967 107914687 106392365 106421039 8060174 8078684 102585148 102582126 102626603 100830529 100844967 142168655 107808991
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