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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100822558   transcription termination factor MTEF18, mitochondrial 
 tae-r.2   123108226   transcription termination factor MTEF18, mitochondrial 
 tae-r.2   123151542   transcription termination factor MTEF18, mitochondrial 
 tae-r.2   123180237   transcription termination factor MTEF18, mitochondrial 
 hvu-r.1   123443350   transcription termination factor MTEF18, mitochondrial-like 
 hvu-r.1   123424560   transcription termination factor MTEF18, mitochondrial-like 
 hvu-r.1   123411166   transcription termination factor MTEF18, mitochondrial 
 osa-u.5   4346047   transcription termination factor MTEF18, mitochondrial 
 zma-u.5   100286156   uncharacterized LOC100286156 
 sbi-r.1   8062430   transcription termination factor MTEF18, mitochondrial 
 ath-u.5   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G06810   transcription termination factor family protein 
 gma-u.5   100803162   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100807690   transcription termination factor MTEF18, mitochondrial 
 sly-u.5   101244846   transcription termination factor MTEF18, mitochondrial-like 
 sly-u.5   101267865   transcription termination factor MTEF18, mitochondrial-like 
 bra-r.6   103850634   transcription termination factor MTEF18, mitochondrial 
 bra-r.6   103857647   transcription termination factor MTEF18, mitochondrial 
 vvi-u.5   100241837   uncharacterized LOC100241837 
 vvi-u.5   100242606   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468939   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   112323605   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468940   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11429701   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11437920   transcription termination factor MTEF18, mitochondrial 
 ghi-r.1   107895057   transcription termination factor MTEF18, mitochondrial 
 ghi-r.1   107891750   transcription termination factor MTEF18, mitochondrial 
 ghi-r.1   107948388   transcription termination factor MTEF18, mitochondrial 
 bna-r.1   106391271   transcription termination factor MTEF18, mitochondrial 
 bna-r.1   106365915   transcription termination factor MTEF18, mitochondrial-like 
 bna-r.1   106397812   transcription termination factor MTEF18, mitochondrial-like 
 sot-r.1   102589903   uncharacterized LOC102589903 
 sot-r.1   102586511   uncharacterized LOC102586511 
 cit-r.1   102621541   transcription termination factor MTEF18, mitochondrial-like 
 cit-r.1   102621440   transcription termination factor MTEF18, mitochondrial-like 
 nta-r.1   107767704   transcription termination factor MTEF18, mitochondrial 
 nta-r.1   107806687   transcription termination factor MTEF18, mitochondrial 
 nta-r.1   107819069   transcription termination factor MTEF18, mitochondrial 

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Top 50 coexpressed genes to 100822558 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100822558 (bdi-r.1 coexpression data)

CoexMap"100822558"


bdiLOC100822558 | Entrez gene ID : 100822558      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 3 1 1 1 2 2 2 2 2 3 2 3 3 2 2 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (73 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1579 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (552 genes)  IEA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (432 genes)  IEA  
Protein XP_003572404.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_003572404.1)
Subcellular
localization
TargetP
mito 9  (predict for XP_003572404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100822558
tae-r.2
for
123108226
tae-r.2
for
123151542
tae-r.2
for
123180237
hvu-r.1
for
123443350
hvu-r.1
for
123424560
hvu-r.1
for
123411166
osa-u.5
for
4346047
zma-u.5
for
100286156
sbi-r.1
for
8062430
ath-u.5
for
AT4G19650
ath-u.5
for
AT5G06810
gma-u.5
for
100803162
gma-u.5
for
100807690
sly-u.5
for
101244846
sly-u.5
for
101267865
bra-r.6
for
103850634
bra-r.6
for
103857647
vvi-u.5
for
100241837
vvi-u.5
for
100242606
ppo-u.5
for
7468939
ppo-u.5
for
112323605
ppo-u.5
for
7468940
mtr-u.5
for
11429701
mtr-u.5
for
11437920
ghi-r.1
for
107895057
ghi-r.1
for
107891750
ghi-r.1
for
107948388
bna-r.1
for
106391271
bna-r.1
for
106365915
bna-r.1
for
106397812
sot-r.1
for
102589903
sot-r.1
for
102586511
cit-r.1
for
102621541
cit-r.1
for
102621440
nta-r.1
for
107767704
nta-r.1
for
107806687
nta-r.1
for
107819069


Ortholog ID: 2490
Species bdi tae tae tae hvu hvu hvu osa zma sbi ath ath ath gma gma sly sly bra bra vvi vvi ppo ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot cit cit nta nta nta
Symbol LOC100822558 LOC123152211 LOC123159610 LOC123165780 LOC123443350 LOC123424560 LOC123410436 LOC4346047 LOC100286156 LOC8062430 AT4G19650 AT5G06810 AT5G06811 LOC100803162 LOC100807690 LOC101244846 LOC101267865 LOC103850634 LOC103827817 LOC100241837 LOC100242606 LOC7468939 LOC112323605 LOC7468940 LOC11429701 LOC11437920 LOC107895057 LOC107891750 LOC107948388 LOC106419046 LOC106437705 LOC106448989 LOC102589903 LOC102586511 LOC102621541 LOC102621440 LOC107767704 LOC107819069 LOC107823561
Function* transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial uncharacterized LOC100286156 transcription termination factor MTEF18, mitochondrial Mitochondrial transcription termination factor family protein transcription termination factor family protein transcription termination factor family protein transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100241837 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like uncharacterized LOC102589903 uncharacterized LOC102586511 transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100822558 123152211 123159610 123165780 123443350 123424560 123410436 4346047 100286156 8062430 827709 830572 28720838 100803162 100807690 101244846 101267865 103850634 103827817 100241837 100242606 7468939 112323605 7468940 11429701 11437920 107895057 107891750 107948388 106419046 106437705 106448989 102589903 102586511 102621541 102621440 107767704 107819069 107823561
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