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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-r.7   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.9   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-e.2   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.4.str   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G06810   transcription termination factor family protein 
 ath-u.5   AT5G06811   transcription termination factor family protein 
 gma-u.5   100807690   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100803162   transcription termination factor MTEF18, mitochondrial 
 vvi-u.5   100241837   uncharacterized LOC100241837 
 vvi-u.5   100242606   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468939   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   112323605   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468940   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11429701   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11437920   transcription termination factor MTEF18, mitochondrial 
 sly-u.5   101267865   transcription termination factor MTEF18, mitochondrial-like 
 sly-u.5   101244846   transcription termination factor MTEF18, mitochondrial-like 
 osa-u.5   4346047   transcription termination factor MTEF18, mitochondrial 
 zma-u.5   100286156   uncharacterized LOC100286156 

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Top 50 coexpressed genes to AT4G19650 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G19650 (ath-u.5 coexpression data)

CoexMap"827709"


athAT4G19650 | Entrez gene ID : 827709      
Species ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 11 2 2 3 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
Protein NP_001328981.1 [sequence] [blastp]
NP_193700.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  mito 3,  cyto_mito 1,  nucl 1  (predict for NP_001328981.1)
cyto 4,  cyto_nucl 4,  nucl 4  (predict for NP_193700.2)
Subcellular
localization
TargetP
mito 8  (predict for NP_001328981.1)
other 9  (predict for NP_193700.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-u.5
for
AT4G19650
ath-r.7
for
AT4G19650
ath-m.9
for
AT4G19650
ath-e.2
for
AT4G19650
ath-m.4.bio
for
AT4G19650
ath-m.4.hor
for
AT4G19650
ath-m.4.lig
for
AT4G19650
ath-m.4.str
for
AT4G19650
ath-m.4.tis
for
AT4G19650
ath-u.5
for
AT5G06810
ath-u.5
for
AT5G06811
gma-u.5
for
100807690
gma-u.5
for
100803162
vvi-u.5
for
100241837
vvi-u.5
for
100242606
ppo-u.5
for
7468939
ppo-u.5
for
112323605
ppo-u.5
for
7468940
mtr-u.5
for
11429701
mtr-u.5
for
11437920
sly-u.5
for
101267865
sly-u.5
for
101244846
osa-u.5
for
4346047
zma-u.5
for
100286156


Ortholog ID: 2490
Species ath ath bra bna bna ghi ghi cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma tae tae hvu hvu sbi bdi
Symbol AT4G19650 AT5G06810 LOC103827817 LOC106437705 LOC106448989 LOC107895057 LOC107891750 LOC102621440 LOC102621541 LOC100807690 LOC100803162 LOC100241837 LOC100242606 LOC112323605 LOC7468939 LOC11429701 LOC11437920 LOC101267865 LOC101244846 LOC102586511 LOC102589903 LOC107819069 LOC107767704 LOC4346047 LOC100286156 LOC123159610 LOC123152211 LOC123410436 LOC123424560 LOC8062430 LOC100822558
Function* Mitochondrial transcription termination factor family protein transcription termination factor family protein transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100241837 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like uncharacterized LOC102586511 uncharacterized LOC102589903 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial uncharacterized LOC100286156 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827709 830572 103827817 106437705 106448989 107895057 107891750 102621440 102621541 100807690 100803162 100241837 100242606 112323605 7468939 11429701 11437920 101267865 101244846 102586511 102589903 107819069 107767704 4346047 100286156 123159610 123152211 123410436 123424560 8062430 100822558
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