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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7468940   transcription termination factor MTEF18, mitochondrial 
 ppo-r.4   7468940   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   112323605   transcription termination factor MTEF18, mitochondrial 
 ppo-u.5   7468939   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100803162   transcription termination factor MTEF18, mitochondrial 
 gma-u.5   100807690   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11429701   transcription termination factor MTEF18, mitochondrial 
 mtr-u.5   11437920   transcription termination factor MTEF18, mitochondrial 
 ath-u.5   AT4G19650   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT5G06810   transcription termination factor family protein 
 vvi-u.5   100242606   transcription termination factor MTEF18, mitochondrial 
 vvi-u.5   100241837   uncharacterized LOC100241837 
 sly-u.5   101244846   transcription termination factor MTEF18, mitochondrial-like 
 sly-u.5   101267865   transcription termination factor MTEF18, mitochondrial-like 
 osa-u.5   4346047   transcription termination factor MTEF18, mitochondrial 
 zma-u.5   100286156   uncharacterized LOC100286156 

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Top 50 coexpressed genes to 7468940 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468940 (ppo-u.5 coexpression data)

CoexMap"7468940"


ppoLOC7468940 | Entrez gene ID : 7468940    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 2 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009658 [list] [network] chloroplast organization  (99 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (718 genes)  IEA  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (569 genes)  IEA  
Protein XP_002322676.4 [sequence] [blastp]
XP_002322677.4 [sequence] [blastp]
XP_052304110.1 [sequence] [blastp]
XP_052304111.1 [sequence] [blastp]
XP_052304112.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  cyto 2,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_002322676.4)
nucl 4,  chlo 2,  cyto 2,  cysk_nucl 2  (predict for XP_002322677.4)
chlo 3,  nucl 3,  cyto 2,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052304110.1)
chlo 3,  nucl 3,  cyto 2,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052304111.1)
chlo 3,  nucl 3,  cyto 2,  mito 1,  cyto_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_052304112.1)
Subcellular
localization
TargetP
scret 3  (predict for XP_002322676.4)
scret 3  (predict for XP_002322677.4)
scret 3  (predict for XP_052304110.1)
scret 3  (predict for XP_052304111.1)
scret 3  (predict for XP_052304112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7468940

.
ppo-r.4
for
7468940

.
ppo-u.5
for
112323605

.
ppo-u.5
for
7468939

.
gma-u.5
for
100803162

.
gma-u.5
for
100807690

.
mtr-u.5
for
11429701

.
mtr-u.5
for
11437920

.
ath-u.5
for
AT4G19650

.
ath-u.5
for
AT5G06810

.
vvi-u.5
for
100242606

.
vvi-u.5
for
100241837

.
sly-u.5
for
101244846

.
sly-u.5
for
101267865

.
osa-u.5
for
4346047

.
zma-u.5
for
100286156

.


Ortholog ID: 2490
Species ath ath gma gma sly sly osa zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT4G19650 AT5G06810 LOC100807690 LOC100803162 LOC101267865 LOC101244846 LOC4346047 LOC100286156 LOC103827817 LOC100241837 LOC100242606 LOC112323605 LOC7468939 LOC11429701 LOC11437920 LOC123159610 LOC123152211 LOC123410436 LOC123424560 LOC107895057 LOC107891750 LOC106437705 LOC106448989 LOC8062430 LOC102586511 LOC102589903 LOC102621440 LOC102621541 LOC100822558 LOC107819069 LOC107767704
Function* Mitochondrial transcription termination factor family protein transcription termination factor family protein transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial uncharacterized LOC100286156 transcription termination factor MTEF18, mitochondrial uncharacterized LOC100241837 transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial uncharacterized LOC102586511 uncharacterized LOC102589903 transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial-like transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial transcription termination factor MTEF18, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 3
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 4
nta03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827709 830572 100807690 100803162 101267865 101244846 4346047 100286156 103827817 100241837 100242606 112323605 7468939 11429701 11437920 123159610 123152211 123410436 123424560 107895057 107891750 106437705 106448989 8062430 102586511 102589903 102621440 102621541 100822558 107819069 107767704
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