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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100824004   uncharacterized LOC100824004 
 bdi-r.1   100835307   E3 ubiquitin-protein ligase Praja-1 
 tae-r.2   123143827   uncharacterized LOC123143827 
 tae-r.2   123165859   probable E3 ubiquitin-protein ligase RHG1A 
 tae-r.2   123132266   E3 ubiquitin-protein ligase RLIM 
 hvu-r.1   123401689   uncharacterized LOC123401689 
 hvu-r.1   123411230   E3 ubiquitin-protein ligase RLIM-like 
 osa-u.5   4328312   probable E3 ubiquitin-protein ligase RHG1A 
 osa-u.5   4341936   uncharacterized LOC4341936 
 zma-u.5   100381944   RING/U-box superfamily protein 
 sbi-r.1   8063811   uncharacterized LOC8063811 
 sbi-r.1   8074641   probable E3 ubiquitin-protein ligase HIP1 
 ath-u.5   AT4G31450   RING/U-box superfamily protein 
 ath-u.5   AT5G10650   RING/U-box superfamily protein 
 ath-u.5   AT5G24870   RING/U-box superfamily protein 
 gma-u.5   100819874   E3 ubiquitin-protein ligase MBR2 
 gma-u.5   100812055   probable E3 ubiquitin-protein ligase RHG1A 
 gma-u.5   100803211   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101266656   probable E3 ubiquitin-protein ligase RHG1A 
 sly-u.5   101255868   probable E3 ubiquitin-protein ligase RHG1A 
 bra-r.6   103862052   E3 ubiquitin-protein ligase Iruka 
 bra-r.6   103874353   E3 ubiquitin-protein ligase MBR1 
 bra-r.6   103855877   E3 ubiquitin-protein ligase MBR2 
 vvi-u.5   100245643   uncharacterized LOC100245643 
 ppo-u.5   18107536   probable E3 ubiquitin-protein ligase RHG1A 
 ppo-u.5   18100754   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   25490046   E3 ubiquitin-protein ligase MBR2 
 mtr-u.5   11433343   uncharacterized LOC11433343 
 ghi-r.1   121219309   E3 ubiquitin-protein ligase MBR2 
 ghi-r.1   107893481   uncharacterized LOC107893481 
 ghi-r.1   107902017   E3 ubiquitin-protein ligase MBR2 
 bna-r.1   125593155   probable E3 ubiquitin-protein ligase HIP1 
 bna-r.1   106380724   probable E3 ubiquitin-protein ligase HIP1 
 sot-r.1   102581264   uncharacterized protein DDB_G0292642-like 
 sot-r.1   102582551   E3 ubiquitin-protein ligase RLIM 
 sot-r.1   102603878   E3 ubiquitin-protein ligase RLIM-like 
 cit-r.1   102627859   hypothetical protein 
 nta-r.1   107764972   uncharacterized LOC107764972 
 nta-r.1   107766429   uncharacterized LOC107766429 
 nta-r.1   107791608   uncharacterized LOC107791608 

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Top 50 coexpressed genes to 100824004 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100824004 (bdi-r.1 coexpression data)

CoexMap"100824004"


bdiLOC100824004 | Entrez gene ID : 100824004      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 3 2 2 1 2 3 3 2 3 1 2 2 3 2 3 1 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (193 genes)  IEA  
Protein XP_003575003.1 [sequence] [blastp]
XP_010233817.1 [sequence] [blastp]
XP_010233818.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_003575003.1)
nucl 9  (predict for XP_010233817.1)
nucl 9  (predict for XP_010233818.1)
Subcellular
localization
TargetP
mito 3,  chlo 3  (predict for XP_003575003.1)
mito 3,  chlo 3  (predict for XP_010233817.1)
mito 3,  chlo 3  (predict for XP_010233818.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100824004
bdi-r.1
for
100835307
tae-r.2
for
123143827
tae-r.2
for
123165859
tae-r.2
for
123132266
hvu-r.1
for
123401689
hvu-r.1
for
123411230
osa-u.5
for
4328312
osa-u.5
for
4341936
zma-u.5
for
100381944
sbi-r.1
for
8063811
sbi-r.1
for
8074641
ath-u.5
for
AT4G31450
ath-u.5
for
AT5G10650
ath-u.5
for
AT5G24870
gma-u.5
for
100819874
gma-u.5
for
100812055
gma-u.5
for
100803211
sly-u.5
for
101266656
sly-u.5
for
101255868
bra-r.6
for
103862052
bra-r.6
for
103874353
bra-r.6
for
103855877
vvi-u.5
for
100245643
ppo-u.5
for
18107536
ppo-u.5
for
18100754
mtr-u.5
for
25490046
mtr-u.5
for
11433343
ghi-r.1
for
121219309
ghi-r.1
for
107893481
ghi-r.1
for
107902017
bna-r.1
for
125593155
bna-r.1
for
106380724
sot-r.1
for
102581264
sot-r.1
for
102582551
sot-r.1
for
102603878
cit-r.1
for
102627859
nta-r.1
for
107764972
nta-r.1
for
107766429
nta-r.1
for
107791608


Ortholog ID: 1632
Species bdi bdi tae tae tae hvu hvu osa osa sbi sbi ath ath ath gma gma gma sly sly bra bra bra vvi ppo ppo mtr mtr ghi ghi ghi bna bna bna sot sot sot cit nta nta nta
Symbol LOC100824004 LOC100835307 LOC123132266 LOC123136313 LOC123160576 LOC123401689 LOC123411230 LOC4328312 LOC4341936 LOC8063811 LOC8074641 AT4G31450 AT5G10650 AT5G24870 LOC100812055 LOC100803211 LOC100787213 LOC101266656 LOC101255868 LOC103862052 LOC103874353 LOC103855877 LOC100245643 LOC18107536 LOC18100754 LOC25490046 LOC11433343 LOC107902017 LOC107932989 LOC107962701 LOC106412562 LOC106420498 LOC106430239 LOC102581264 LOC102582551 LOC102603878 LOC102627859 LOC107764972 LOC107766429 LOC107799480
Function* uncharacterized LOC100824004 E3 ubiquitin-protein ligase Praja-1 E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase RLIM probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC123401689 E3 ubiquitin-protein ligase RLIM-like probable E3 ubiquitin-protein ligase RHG1A uncharacterized LOC4341936 uncharacterized LOC8063811 probable E3 ubiquitin-protein ligase HIP1 RING/U-box superfamily protein RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 probable E3 ubiquitin-protein ligase RHG1A probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase MBR1 E3 ubiquitin-protein ligase MBR2 uncharacterized LOC100245643 probable E3 ubiquitin-protein ligase RHG1A E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 uncharacterized LOC11433343 E3 ubiquitin-protein ligase MBR2 uncharacterized LOC107932989 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase MBR2 E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase MBR2-like uncharacterized protein DDB_G0292642-like E3 ubiquitin-protein ligase RLIM E3 ubiquitin-protein ligase RLIM-like hypothetical protein uncharacterized LOC107764972 uncharacterized LOC107766429 uncharacterized LOC107799480
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00071 Fatty acid degradation 4
osa01212 Fatty acid metabolism 4
osa00592 alpha-Linolenic acid metabolism 3
osa04146 Peroxisome 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04626 Plant-pathogen interaction 3
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
bra00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00052 Galactose metabolism 3
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
bna03015 mRNA surveillance pathway 3
bna04382 Cornified envelope formation 3
bna00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 3
sot00280 Valine, leucine and isoleucine degradation 2
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00071 Fatty acid degradation 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta04016 MAPK signaling pathway - plant 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04517 IgSF CAM signaling 2
nta04814 Motor proteins 2
nta00910 Nitrogen metabolism 2
nta04075 Plant hormone signal transduction 2
nta00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100824004 100835307 123132266 123136313 123160576 123401689 123411230 4328312 4341936 8063811 8074641 829272 830929 832556 100812055 100803211 100787213 101266656 101255868 103862052 103874353 103855877 100245643 18107536 18100754 25490046 11433343 107902017 107932989 107962701 106412562 106420498 106430239 102581264 102582551 102603878 102627859 107764972 107766429 107799480
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