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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100825966   30S ribosomal protein 2, chloroplastic 
 osa-u.5   4346605   30S ribosomal protein 2, chloroplastic 
 zma-u.5   100282980   uncharacterized LOC100282980 
 ath-u.5   PSRP2   RNA-binding (RRM/RBD/RNP motifs) family protein 
 gma-u.5   100811197   RNA recognition motif (RRM) domain-containing protein 
 gma-u.5   100783567   RNA recognition motif (RRM) domain-containing protein 
 vvi-u.5   100266645   small ribosomal subunit protein cS22 
 ppo-u.5   7454889   30S ribosomal protein 2, chloroplastic 
 mtr-u.5   11440749   30S ribosomal protein 2, chloroplastic 

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Top 50 coexpressed genes to 100825966 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100825966 (bdi-r.1 coexpression data)

CoexMap"100825966"


bdiLOC100825966 | Entrez gene ID : 100825966      
Species bdi osa zma ath gma vvi ppo mtr hvu bra cit bna sbi sly ghi sot nta cre tae
Paralog 1 1 1 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03010 [list] [network] Ribosome (483 genes)
bdi03015 [list] [network] mRNA surveillance pathway (130 genes)
bdi03018 [list] [network] RNA degradation (115 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (825 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (271 genes)  IEA  
Protein XP_003577917.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_003577917.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_003577917.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100825966
osa-u.5
for
4346605
zma-u.5
for
100282980
ath-u.5
for
PSRP2
gma-u.5
for
100811197
gma-u.5
for
100783567
vvi-u.5
for
100266645
ppo-u.5
for
7454889
mtr-u.5
for
11440749


Ortholog ID: 8978
Species bdi tae tae hvu osa zma sbi ath gma gma bra vvi ppo mtr ghi ghi cit nta nta
Symbol LOC100825966 LOC123120979 LOC123103412 LOC123397727 LOC4346605 LOC100282980 LOC8063470 PSRP2 LOC100811197 LOC100783567 LOC103848533 LOC100266645 LOC7454889 LOC11440749 LOC107914044 LOC107959531 LOC102608147 LOC107797860 LOC107798186
Function* 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic uncharacterized LOC100282980 30S ribosomal protein 2, chloroplastic RNA-binding (RRM/RBD/RNP motifs) family protein RNA recognition motif (RRM) domain-containing protein RNA recognition motif (RRM) domain-containing protein 30S ribosomal protein 2, chloroplastic small ribosomal subunit protein cS22 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic 30S ribosomal protein 2, chloroplastic small ribosomal subunit protein cS22 small ribosomal subunit protein cS22
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 7
bdi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03018 RNA degradation 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 12
zma00860 Porphyrin metabolism 4
zma01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 10
gma03015 mRNA surveillance pathway 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
bra00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 6
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 3
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi00860 Porphyrin metabolism 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 7
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00750 Vitamin B6 metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100825966 123120979 123103412 123397727 4346605 100282980 8063470 824379 100811197 100783567 103848533 100266645 7454889 11440749 107914044 107959531 102608147 107797860 107798186
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