Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100826046   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 tae-r.2   123138409   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 hvu-r.1   123401892   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 osa-u.5   4330860   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 zma-u.5   103654223   pentatricopeptide repeat-containing protein, chloroplastic-like 
 ath-u.5   PDE247   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100792726   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 sly-u.5   101256843   pentatricopeptide repeat-containing protein 
 bra-r.6   103836512   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 vvi-u.5   100249599   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ppo-u.5   7478495   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 mtr-u.5   11409652   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 mtr-u.5   112419508   pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 ghi-r.1   107889204   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ghi-r.1   107891578   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 bna-r.1   125577196   pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 bna-r.1   106365686   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 sot-r.1   102587859   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 cit-r.1   102609207   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 nta-r.1   107818941   pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 nta-r.1   107789171   pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 

close


Top 50 coexpressed genes to 100826046 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100826046 (bdi-r.1 coexpression data)

CoexMap""


bdiLOC100826046 | Entrez gene ID : 100826046      
Species bdi tae hvu osa zma ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre sbi
Paralog 1 1 1 1 1 1 1 1 1 1 1 2 2 2 1 1 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function pentatricopeptide repeat-containing protein At1g05750, chloroplastic
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003573036.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1,  vacu 1  (predict for XP_003573036.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003573036.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100826046
tae-r.2
for
123138409
hvu-r.1
for
123401892
osa-u.5
for
4330860
zma-u.5
for
103654223
ath-u.5
for
PDE247
gma-u.5
for
100792726
sly-u.5
for
101256843
bra-r.6
for
103836512
vvi-u.5
for
100249599
ppo-u.5
for
7478495
mtr-u.5
for
11409652
mtr-u.5
for
112419508
ghi-r.1
for
107889204
ghi-r.1
for
107891578
bna-r.1
for
125577196
bna-r.1
for
106365686
sot-r.1
for
102587859
cit-r.1
for
102609207
nta-r.1
for
107818941
nta-r.1
for
107789171

Please wait a moment.



Ortholog ID: 9198
Species bdi tae hvu osa zma ath gma sly bra vvi ppo mtr mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100826046 LOC123138409 LOC123401892 LOC4330860 LOC103654223 PDE247 LOC100792726 LOC101256843 LOC103836512 LOC100249599 LOC7478495 LOC11409652 LOC112419508 LOC107889204 LOC107891578 LOC125577196 LOC106365686 LOC102587859 LOC102609207 LOC107818941 LOC107789171
Function* pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100826046 123138409 123401892 4330860 103654223 837083 100792726 101256843 103836512 100249599 7478495 11409652 112419508 107889204 107891578 125577196 106365686 102587859 102609207 107818941 107789171
The preparation time of this page was 1.5 [sec].