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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478495   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ppo-r.4   7478495   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ppo-m.4   7478495   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 gma-u.5   100792726   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 mtr-u.5   112419508   pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 mtr-u.5   11409652   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ath-u.5   PDE247   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100249599   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 sly-u.5   101256843   pentatricopeptide repeat-containing protein 
 osa-u.5   4330860   pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 zma-u.5   103654223   pentatricopeptide repeat-containing protein, chloroplastic-like 

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Top 50 coexpressed genes to 7478495 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478495 (ppo-u.5 coexpression data)

CoexMap"7478495"


ppoLOC7478495 | Entrez gene ID : 7478495    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_052307322.1 [sequence] [blastp]
XP_052307324.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  chlo_mito 5  (predict for XP_052307322.1)
chlo 9,  chlo_mito 5  (predict for XP_052307324.1)
Subcellular
localization
TargetP
chlo 6,  other 3  (predict for XP_052307322.1)
chlo 6,  other 3  (predict for XP_052307324.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478495

.
ppo-r.4
for
7478495

.
ppo-m.4
for
7478495

.
gma-u.5
for
100792726

.
mtr-u.5
for
112419508

.
mtr-u.5
for
11409652

.
ath-u.5
for
PDE247

.
vvi-u.5
for
100249599

.
sly-u.5
for
101256843

.
osa-u.5
for
4330860

.
zma-u.5
for
103654223

.


Ortholog ID: 9198
Species ath gma sly osa zma bra vvi ppo mtr mtr tae hvu ghi ghi bna bna sot cit bdi nta nta
Symbol PDE247 LOC100792726 LOC101256843 LOC4330860 LOC103654223 LOC103836512 LOC100249599 LOC7478495 LOC112419508 LOC11409652 LOC123138409 LOC123401892 LOC107889204 LOC107891578 LOC125577196 LOC106365686 LOC102587859 LOC102609207 LOC100826046 LOC107789171 LOC107818941
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837083 100792726 101256843 4330860 103654223 103836512 100249599 7478495 112419508 11409652 123138409 123401892 107889204 107891578 125577196 106365686 102587859 102609207 100826046 107789171 107818941
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