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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107789171  pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 sly-u.5  101256843  pentatricopeptide repeat-containing protein 
 ath-u.5  PDE247  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100792726  pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 vvi-u.5  100249599  pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 ppo-u.5  7478495  pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 mtr-u.5  11409652  pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 mtr-u.5  112419508  pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like 
 osa-u.5  4330860  pentatricopeptide repeat-containing protein At1g05750, chloroplastic 
 zma-u.5  103654223  pentatricopeptide repeat-containing protein, chloroplastic-like 

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Top 50 coexpressed genes to 107789171 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107789171 (nta-r.1 coexpression data)

CoexMap"107789171"


ntaLOC107789171 | Entrez gene ID : 107789171
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016466435.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_016466435.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016466435.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107789171


sly-u.5
for
101256843


ath-u.5
for
PDE247


gma-u.5
for
100792726


vvi-u.5
for
100249599


ppo-u.5
for
7478495


mtr-u.5
for
11409652


mtr-u.5
for
112419508


osa-u.5
for
4330860


zma-u.5
for
103654223



Ortholog ID: 9198
Species nta nta sly sot ath gma bra vvi ppo mtr mtr ghi ghi bna bna cit osa zma tae hvu bdi
Symbol LOC107789171 LOC107818941 LOC101256843 LOC102587859 PDE247 LOC100792726 LOC103836512 LOC100249599 LOC7478495 LOC112419508 LOC11409652 LOC107889204 LOC107891578 LOC125577196 LOC106365686 LOC102609207 LOC4330860 LOC103654223 LOC123138409 LOC123401892 LOC100826046
Function* pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein, chloroplastic-like pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic pentatricopeptide repeat-containing protein At1g05750, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 13
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107789171 107818941 101256843 102587859 837083 100792726 103836512 100249599 7478495 112419508 11409652 107889204 107891578 125577196 106365686 102609207 4330860 103654223 123138409 123401892 100826046
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