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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100829083   pentatricopeptide repeat-containing protein At2g33680 
 tae-r.2   123119303   pentatricopeptide repeat-containing protein At2g33680 
 tae-r.2   123102121   pentatricopeptide repeat-containing protein At2g33680 
 hvu-r.1   123397510   pentatricopeptide repeat-containing protein At2g33680 
 osa-u.5   4325438   pentatricopeptide repeat-containing protein At2g33680 
 zma-u.5   103651554   pentatricopeptide repeat-containing protein At2g33680 
 sbi-r.1   8079490   pentatricopeptide repeat-containing protein At2g33680 
 ath-u.5   AT2G33680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100794103   pentatricopeptide repeat-containing protein At2g33680 
 sly-u.5   101257335   pentatricopeptide repeat-containing protein At2g33680 
 vvi-u.5   100262605   pentatricopeptide repeat-containing protein At2g33680 
 ppo-u.5   7478890   pentatricopeptide repeat-containing protein At2g33680 
 mtr-u.5   11443127   pentatricopeptide repeat-containing protein At2g33680 
 ghi-r.1   107917981   pentatricopeptide repeat-containing protein At2g33680 
 ghi-r.1   121204513   pentatricopeptide repeat-containing protein At2g33680 
 bna-r.1   106451170   pentatricopeptide repeat-containing protein At2g33680 
 bna-r.1   106347190   pentatricopeptide repeat-containing protein At2g33680-like 
 sot-r.1   102601466   pentatricopeptide repeat-containing protein At2g33680 
 nta-r.1   107806249   pentatricopeptide repeat-containing protein At2g33680-like 
 nta-r.1   107792452   pentatricopeptide repeat-containing protein At2g33680 

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Top 50 coexpressed genes to 100829083 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100829083 (bdi-r.1 coexpression data)

CoexMap"100829083"


bdiLOC100829083 | Entrez gene ID : 100829083      
Species bdi tae hvu osa zma sbi ath gma sly vvi ppo mtr ghi bna sot nta bra cre cit
Paralog 1 2 1 1 1 1 1 1 1 1 1 1 2 2 1 2 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_003565766.1 [sequence] [blastp]
XP_010230887.1 [sequence] [blastp]
XP_010230888.1 [sequence] [blastp]
XP_024315944.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  E.R. 3,  mito 2,  nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_003565766.1)
chlo 3,  E.R. 3,  mito 2,  nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_010230887.1)
chlo 3,  E.R. 3,  mito 2,  nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_010230888.1)
chlo 3,  E.R. 3,  mito 2,  nucl 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_024315944.1)
Subcellular
localization
TargetP
mito 4  (predict for XP_003565766.1)
mito 4  (predict for XP_010230887.1)
mito 4  (predict for XP_010230888.1)
mito 4  (predict for XP_024315944.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100829083
tae-r.2
for
123119303
tae-r.2
for
123102121
hvu-r.1
for
123397510
osa-u.5
for
4325438
zma-u.5
for
103651554
sbi-r.1
for
8079490
ath-u.5
for
AT2G33680
gma-u.5
for
100794103
sly-u.5
for
101257335
vvi-u.5
for
100262605
ppo-u.5
for
7478890
mtr-u.5
for
11443127
ghi-r.1
for
107917981
ghi-r.1
for
121204513
bna-r.1
for
106451170
bna-r.1
for
106347190
sot-r.1
for
102601466
nta-r.1
for
107806249
nta-r.1
for
107792452


Ortholog ID: 11663
Species bdi tae tae hvu osa zma sbi ath gma sly vvi ppo mtr ghi ghi bna bna sot nta nta
Symbol LOC100829083 LOC123119303 LOC123102121 LOC123397510 LOC4325438 LOC103651554 LOC8079490 AT2G33680 LOC100794103 LOC101257335 LOC100262605 LOC7478890 LOC11443127 LOC107917981 LOC121204513 LOC106451170 LOC106347190 LOC102601466 LOC107806249 LOC107792452
Function* pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 4
tae03008 Ribosome biogenesis in eukaryotes 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100829083 123119303 123102121 123397510 4325438 103651554 8079490 817933 100794103 101257335 100262605 7478890 11443127 107917981 121204513 106451170 106347190 102601466 107806249 107792452
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