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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7478890   pentatricopeptide repeat-containing protein At2g33680 
 ppo-r.4   7478890   pentatricopeptide repeat-containing protein At2g33680 
 ppo-m.4   7478890   pentatricopeptide repeat-containing protein At2g33680 
 gma-u.5   100794103   pentatricopeptide repeat-containing protein At2g33680 
 mtr-u.5   11443127   pentatricopeptide repeat-containing protein At2g33680 
 ath-u.5   AT2G33680   Tetratricopeptide repeat (TPR)-like superfamily protein 
 vvi-u.5   100262605   pentatricopeptide repeat-containing protein At2g33680 
 sly-u.5   101257335   pentatricopeptide repeat-containing protein At2g33680 
 osa-u.5   4325438   pentatricopeptide repeat-containing protein At2g33680 
 zma-u.5   103651554   pentatricopeptide repeat-containing protein At2g33680 

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Top 50 coexpressed genes to 7478890 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7478890 (ppo-u.5 coexpression data)

CoexMap"7478890"


ppoLOC7478890 | Entrez gene ID : 7478890    
Species ppo gma mtr ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002318942.2 [sequence] [blastp]
XP_024439052.1 [sequence] [blastp]
XP_024439053.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  mito 1  (predict for XP_002318942.2)
chlo 9,  mito 1  (predict for XP_024439052.1)
chlo 9,  mito 1  (predict for XP_024439053.1)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_002318942.2)
other 8,  mito 4  (predict for XP_024439052.1)
other 8,  mito 4  (predict for XP_024439053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7478890

.
ppo-r.4
for
7478890

.
ppo-m.4
for
7478890

.
gma-u.5
for
100794103

.
mtr-u.5
for
11443127

.
ath-u.5
for
AT2G33680

.
vvi-u.5
for
100262605

.
sly-u.5
for
101257335

.
osa-u.5
for
4325438

.
zma-u.5
for
103651554

.


Ortholog ID: 11663
Species ath gma sly osa zma vvi ppo mtr tae hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol AT2G33680 LOC100794103 LOC101257335 LOC4325438 LOC103651554 LOC100262605 LOC7478890 LOC11443127 LOC123102121 LOC123397510 LOC121204513 LOC107917981 LOC106347190 LOC106451170 LOC8079490 LOC102601466 LOC100829083 LOC107806249 LOC107792452
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817933 100794103 101257335 4325438 103651554 100262605 7478890 11443127 123102121 123397510 121204513 107917981 106347190 106451170 8079490 102601466 100829083 107806249 107792452
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