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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1  107792452  pentatricopeptide repeat-containing protein At2g33680 
 sly-u.5  101257335  pentatricopeptide repeat-containing protein At2g33680 
 ath-u.5  AT2G33680  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100794103  pentatricopeptide repeat-containing protein At2g33680 
 vvi-u.5  100262605  pentatricopeptide repeat-containing protein At2g33680 
 ppo-u.5  7478890  pentatricopeptide repeat-containing protein At2g33680 
 mtr-u.5  11443127  pentatricopeptide repeat-containing protein At2g33680 
 osa-u.5  4325438  pentatricopeptide repeat-containing protein At2g33680 
 zma-u.5  103651554  pentatricopeptide repeat-containing protein At2g33680 

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Top 50 coexpressed genes to 107792452 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107792452 (nta-r.1 coexpression data)

CoexMap"107792452"


ntaLOC107792452 | Entrez gene ID : 107792452
Species nta sly ath gma vvi ppo mtr osa zma bdi hvu bra cit bna sbi ghi sot cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016470149.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016470149.2)
Subcellular
localization
TargetP
chlo 5  (predict for XP_016470149.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

nta-r.1
for
107792452


sly-u.5
for
101257335


ath-u.5
for
AT2G33680


gma-u.5
for
100794103


vvi-u.5
for
100262605


ppo-u.5
for
7478890


mtr-u.5
for
11443127


osa-u.5
for
4325438


zma-u.5
for
103651554



Ortholog ID: 11663
Species nta nta sly sot ath gma vvi ppo mtr ghi ghi bna bna osa zma tae hvu sbi bdi
Symbol LOC107806249 LOC107792452 LOC101257335 LOC102601466 AT2G33680 LOC100794103 LOC100262605 LOC7478890 LOC11443127 LOC121204513 LOC107917981 LOC106347190 LOC106451170 LOC4325438 LOC103651554 LOC123102121 LOC123397510 LOC8079490 LOC100829083
Function* pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680-like pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680 pentatricopeptide repeat-containing protein At2g33680
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107806249 107792452 101257335 102601466 817933 100794103 100262605 7478890 11443127 121204513 107917981 106347190 106451170 4325438 103651554 123102121 123397510 8079490 100829083
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