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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100830324   uncharacterized LOC100830324 
 osa-u.5   4323878   Protein SUBSTANDARD STARCH GRAIN 4, chloroplastic 
 zma-u.5   103648841   protein SUBSTANDARD STARCH GRAIN 4, chloroplastic 
 zma-u.5   103649669   protein SUBSTANDARD STARCH GRAIN 4, chloroplastic 
 ath-u.5   emb2410   embryo defective 2410 
 gma-u.5   100788741   protein TIC236, chloroplastic 
 gma-u.5   100779257   protein TIC236, chloroplastic-like 
 gma-u.5   100796955   protein TIC236, chloroplastic 
 sly-u.5   101257991   protein TIC236, chloroplastic 
 vvi-u.5   100247424   protein TIC236, chloroplastic 
 ppo-u.5   7458992   protein TIC236, chloroplastic 
 mtr-u.5   25481915   protein TIC236, chloroplastic 
 mtr-u.5   11429977   protein TIC236, chloroplastic 

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Top 50 coexpressed genes to 100830324 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100830324 (bdi-r.1 coexpression data)

CoexMap"100830324"


bdiLOC100830324 | Entrez gene ID : 100830324      
Species bdi osa zma ath gma sly vvi ppo mtr tae hvu ghi cit bra cre sbi bna nta sot
Paralog 1 1 2 1 3 1 1 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009306 [list] [network] protein secretion  (17 genes)  IEA  
GO CC
GO:0005886 [list] [network] plasma membrane  (914 genes)  IEA  
GO MF
Protein XP_003569793.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9,  nucl 1,  pero 1  (predict for XP_003569793.2)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for XP_003569793.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100830324

.
osa-u.5
for
4323878

.
zma-u.5
for
103648841

.
zma-u.5
for
103649669

.
ath-u.5
for
emb2410

.
gma-u.5
for
100788741

.
gma-u.5
for
100779257

.
gma-u.5
for
100796955

.
sly-u.5
for
101257991

.
vvi-u.5
for
100247424

.
ppo-u.5
for
7458992

.
mtr-u.5
for
25481915

.
mtr-u.5
for
11429977

.


Ortholog ID: 6227
Species ath gma gma sly osa zma zma bra vvi ppo mtr mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb2410 LOC100788741 LOC100796955 LOC101257991 LOC4323878 LOC103648841 LOC103632223 LOC103864684 LOC100247424 LOC7458992 LOC11429977 LOC25481915 LOC123069001 LOC123077531 LOC123442983 LOC107901377 LOC121218263 LOC106391138 LOC106446814 CHLRE_05g243150v5 LOC8056518 LOC102582430 LOC102627941 LOC100830324 LOC107772434 LOC107777328
Function* embryo defective 2410 protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic Protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein SUBSTANDARD STARCH GRAIN 4, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic protein TIC236, chloroplastic uncharacterized protein uncharacterized LOC8056518 uncharacterized LOC102582430 hypothetical protein uncharacterized LOC100830324 protein TIC236, chloroplastic-like protein TIC236, chloroplastic-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
ath03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma02010 ABC transporters 2
gma04146 Peroxisome 2
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00310 Lysine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03440 Homologous recombination 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta02010 ABC transporters 2
nta04146 Peroxisome 2
nta03460 Fanconi anemia pathway 2
nta04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00310 Lysine degradation 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817107 100788741 100796955 101257991 4323878 103648841 103632223 103864684 100247424 7458992 11429977 25481915 123069001 123077531 123442983 107901377 121218263 106391138 106446814 5726284 8056518 102582430 102627941 100830324 107772434 107777328
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