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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100830957   preprotein translocase subunit SECY, chloroplastic 
 tae-r.2   123120625   preprotein translocase subunit SECY, chloroplastic 
 tae-r.2   123103281   preprotein translocase subunit SECY, chloroplastic 
 tae-r.2   123111470   preprotein translocase subunit SECY, chloroplastic 
 hvu-r.1   123399075   preprotein translocase subunit SECY, chloroplastic 
 osa-u.5   4345097   preprotein translocase subunit SECY, chloroplastic-like 
 zma-u.5   542482   Chloroplast SecY-1 
 sbi-r.1   8082432   preprotein translocase subunit SECY, chloroplastic 
 ath-u.5   SCY1   SECY homolog 1 
 gma-u.5   100810430   preprotein translocase subunit SECY, chloroplastic 
 sly-u.5   101263722   preprotein translocase subunit SCY1, chloroplastic 
 bra-r.6   103828373   preprotein translocase subunit SCY1, chloroplastic 
 vvi-u.5   100248517   preprotein translocase subunit SECY, chloroplastic 
 ppo-u.5   7493346   preprotein translocase subunit SCY1, chloroplastic 
 ppo-u.5   7465997   preprotein translocase subunit SCY1, chloroplastic 
 mtr-u.5   25488366   preprotein translocase subunit SECY, chloroplastic 
 ghi-r.1   107941416   preprotein translocase subunit SCY1, chloroplastic 
 ghi-r.1   107907467   preprotein translocase subunit SCY1, chloroplastic 
 bna-r.1   106357637   preprotein translocase subunit SCY1, chloroplastic 
 bna-r.1   111215907   preprotein translocase subunit SCY1, chloroplastic 
 sot-r.1   102585784   preprotein translocase subunit SCY1, chloroplastic 
 cit-r.1   102616382   preprotein translocase subunit SCY1, chloroplastic 
 nta-r.1   107788151   preprotein translocase subunit SCY1, chloroplastic 
 nta-r.1   107774575   preprotein translocase subunit SCY1, chloroplastic-like 
 cre-r.1   CHLRE_16g681900v5   uncharacterized protein 

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Top 50 coexpressed genes to 100830957 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100830957 (bdi-r.1 coexpression data)

CoexMap"100830957"


bdiLOC100830957 | Entrez gene ID : 100830957      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 1 1 1 1 2 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03060 [list] [network] Protein export (61 genes)
bdi04141 [list] [network] Protein processing in endoplasmic reticulum (196 genes)
bdi04145 [list] [network] Phagosome (79 genes)
GO BP
GO:0006616 [list] [network] SRP-dependent cotranslational protein targeting to membrane, translocation  (8 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (72 genes)  IEA  
GO MF
GO:0008320 [list] [network] protein transmembrane transporter activity  (35 genes)  IEA  
GO:0005048 [list] [network] signal sequence binding  (42 genes)  IEA  
Protein XP_003573616.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  nucl 1,  plas 1,  extr 1,  nucl_plas 1  (predict for XP_003573616.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003573616.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100830957
tae-r.2
for
123120625
tae-r.2
for
123103281
tae-r.2
for
123111470
hvu-r.1
for
123399075
osa-u.5
for
4345097
zma-u.5
for
542482
sbi-r.1
for
8082432
ath-u.5
for
SCY1
gma-u.5
for
100810430
sly-u.5
for
101263722
bra-r.6
for
103828373
vvi-u.5
for
100248517
ppo-u.5
for
7493346
ppo-u.5
for
7465997
mtr-u.5
for
25488366
ghi-r.1
for
107941416
ghi-r.1
for
107907467
bna-r.1
for
106357637
bna-r.1
for
111215907
sot-r.1
for
102585784
cit-r.1
for
102616382
nta-r.1
for
107788151
nta-r.1
for
107774575
cre-r.1
for
CHLRE_16g681900v5


Ortholog ID: 9988
Species bdi tae tae tae hvu osa zma sbi ath gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100830957 LOC123120625 LOC123103281 LOC123111470 LOC123399075 LOC4345097 LOC542482 LOC8082432 SCY1 LOC100810430 LOC101263722 LOC103828373 LOC100248517 LOC7493346 LOC7465997 LOC25488366 LOC107941416 LOC107907467 LOC106357637 LOC111215907 LOC102585784 LOC102616382 LOC107788151 LOC107774575 CHLRE_16g681900v5
Function* preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic-like Chloroplast SecY-1 preprotein translocase subunit SECY, chloroplastic SECY homolog 1 preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma03060 Protein export 2
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03060 Protein export 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100830957 123120625 123103281 123111470 123399075 4345097 542482 8082432 816386 100810430 101263722 103828373 100248517 7493346 7465997 25488366 107941416 107907467 106357637 111215907 102585784 102616382 107788151 107774575 5717564
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