Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107907467   preprotein translocase subunit SCY1, chloroplastic 
 ghi-r.1   107941416   preprotein translocase subunit SCY1, chloroplastic 
 ath-u.5   SCY1   SECY homolog 1 
 bra-r.6   103828373   preprotein translocase subunit SCY1, chloroplastic 
 bna-r.1   106357637   preprotein translocase subunit SCY1, chloroplastic 
 bna-r.1   111215907   preprotein translocase subunit SCY1, chloroplastic 
 cit-r.1   102616382   preprotein translocase subunit SCY1, chloroplastic 
 gma-u.5   100810430   preprotein translocase subunit SECY, chloroplastic 
 vvi-u.5   100248517   preprotein translocase subunit SECY, chloroplastic 
 ppo-u.5   7493346   preprotein translocase subunit SCY1, chloroplastic 
 ppo-u.5   7465997   preprotein translocase subunit SCY1, chloroplastic 
 mtr-u.5   25488366   preprotein translocase subunit SECY, chloroplastic 
 sly-u.5   101263722   preprotein translocase subunit SCY1, chloroplastic 
 sot-r.1   102585784   preprotein translocase subunit SCY1, chloroplastic 
 nta-r.1   107788151   preprotein translocase subunit SCY1, chloroplastic 
 nta-r.1   107774575   preprotein translocase subunit SCY1, chloroplastic-like 
 osa-u.5   4345097   preprotein translocase subunit SECY, chloroplastic-like 
 zma-u.5   542482   Chloroplast SecY-1 
 tae-r.2   123103281   preprotein translocase subunit SECY, chloroplastic 
 tae-r.2   123120625   preprotein translocase subunit SECY, chloroplastic 
 tae-r.2   123111470   preprotein translocase subunit SECY, chloroplastic 
 hvu-r.1   123399075   preprotein translocase subunit SECY, chloroplastic 
 sbi-r.1   8082432   preprotein translocase subunit SECY, chloroplastic 
 bdi-r.1   100830957   preprotein translocase subunit SECY, chloroplastic 
 cre-r.1   CHLRE_16g681900v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107907467 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107907467 (ghi-r.1 coexpression data)

CoexMap"107907467"


ghiLOC107907467 | Entrez gene ID : 107907467    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 2 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03060 [list] [network] Protein export (151 genes)
ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
ghi04145 [list] [network] Phagosome (280 genes)
GO BP
GO:0006616 [list] [network] SRP-dependent cotranslational protein targeting to membrane, translocation  (27 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (283 genes)  IEA  
GO MF
GO:0008320 [list] [network] protein transmembrane transporter activity  (76 genes)  IEA  
GO:0005048 [list] [network] signal sequence binding  (163 genes)  IEA  
Protein XP_016690354.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  plas 2,  mito 1,  E.R._plas 1  (predict for XP_016690354.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_016690354.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107907467
ghi-r.1
for
107941416
ath-u.5
for
SCY1
bra-r.6
for
103828373
bna-r.1
for
106357637
bna-r.1
for
111215907
cit-r.1
for
102616382
gma-u.5
for
100810430
vvi-u.5
for
100248517
ppo-u.5
for
7493346
ppo-u.5
for
7465997
mtr-u.5
for
25488366
sly-u.5
for
101263722
sot-r.1
for
102585784
nta-r.1
for
107788151
nta-r.1
for
107774575
osa-u.5
for
4345097
zma-u.5
for
542482
tae-r.2
for
123103281
tae-r.2
for
123120625
tae-r.2
for
123111470
hvu-r.1
for
123399075
sbi-r.1
for
8082432
bdi-r.1
for
100830957
cre-r.1
for
CHLRE_16g681900v5


Ortholog ID: 9988
Species ghi ghi ath bra bna bna cit gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC107907467 LOC107941416 SCY1 LOC103828373 LOC106357637 LOC111215907 LOC102616382 LOC100810430 LOC100248517 LOC7493346 LOC7465997 LOC25488366 LOC101263722 LOC102585784 LOC107788151 LOC107774575 LOC4345097 LOC542482 LOC123103281 LOC123120625 LOC123111470 LOC123399075 LOC8082432 LOC100830957 CHLRE_16g681900v5
Function* preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic SECY homolog 1 preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic preprotein translocase subunit SCY1, chloroplastic-like preprotein translocase subunit SECY, chloroplastic-like Chloroplast SecY-1 preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic preprotein translocase subunit SECY, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 2
bna04141 Protein processing in endoplasmic reticulum 2
bna04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00710 Carbon fixation by Calvin cycle 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 2
vvi03060 Protein export 2
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 3
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 10
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00860 Porphyrin metabolism 2
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03060 Protein export 4
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 3
zma03060 Protein export 2
zma00230 Purine metabolism 2
zma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03060 Protein export 4
tae00053 Ascorbate and aldarate metabolism 3
tae00480 Glutathione metabolism 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
tae01250 Biosynthesis of nucleotide sugars 3
tae00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 3
hvu03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cre01230 Biosynthesis of amino acids 2
cre00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107907467 107941416 816386 103828373 106357637 111215907 102616382 100810430 100248517 7493346 7465997 25488366 101263722 102585784 107788151 107774575 4345097 542482 123103281 123120625 123111470 123399075 8082432 100830957 5717564
The preparation time of this page was 0.1 [sec].