ATTED-II : GeneCoexpression result

Species	Gene	Description
bdi-r.1	100831383	zinc finger CCHC domain-containing protein 7
osa-u.5	4350762	uncharacterized LOC4350762
zma-u.5	103654520	zinc finger CCHC domain-containing protein 7-like
zma-u.5	100274278	zinc knuckle (CCHC-type) family protein
ath-u.5	AT3G43590	zinc knuckle (CCHC-type) family protein
gma-u.5	100794448	zinc finger CCHC domain-containing protein 7
gma-u.5	100780476	protein AIR1
sly-u.5	101265444	uncharacterized LOC101265444
sly-u.5	101259478	uncharacterized LOC101259478
sly-u.5	101257334	uncharacterized LOC101257334
vvi-u.5	100259916	uncharacterized LOC100259916
vvi-u.5	100252970	uncharacterized LOC100252970
ppo-u.5	7469918	cellular nucleic acid-binding protein homolog
ppo-u.5	7478597	uncharacterized LOC7478597
ppo-u.5	18098036	uncharacterized LOC18098036
mtr-u.5	112420400	zinc finger CCHC domain-containing protein 7
mtr-u.5	112422218	zinc finger CCHC domain-containing protein 7

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0008270 [list] [network] zinc ion binding	(707 genes)	IEA
GO:0003676 [list] [network] nucleic acid binding	(3313 genes)	IEA

Protein

XP_003577431.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto 1, mito 1, plas 1, extr 1, mito_plas 1, cyto_plas 1

(predict for XP_003577431.1)

Subcellular
localization
TargetP

mito 4, other 3

(predict for XP_003577431.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bdi-r.1 for 100831383	osa-u.5 for 4350762	zma-u.5 for 103654520	zma-u.5 for 100274278	ath-u.5 for AT3G43590	gma-u.5 for 100794448	gma-u.5 for 100780476	sly-u.5 for 101265444	sly-u.5 for 101259478	sly-u.5 for 101257334	vvi-u.5 for 100259916	vvi-u.5 for 100252970	ppo-u.5 for 7469918	ppo-u.5 for 7478597	ppo-u.5 for 18098036	mtr-u.5 for 112420400	mtr-u.5 for 112422218

Ortholog

Ortholog ID: 3346

Species

bdi

tae

hvu

osa

zma

sbi

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

zinc finger CCHC domain-containing protein 7

zinc finger CCHC domain-containing protein 7-like

uncharacterized LOC4350762

zinc knuckle (CCHC-type) family protein

zinc finger CCHC domain-containing protein 7-like

protein AIR1

zinc finger CCHC domain-containing protein 7

protein AIR1

uncharacterized LOC101265444

uncharacterized LOC101257334

protein AIR1

uncharacterized LOC103842474

uncharacterized LOC100252970

uncharacterized LOC100259916

uncharacterized LOC7478597

cellular nucleic acid-binding protein homolog

zinc finger CCHC domain-containing protein 7

cold shock protein 1

uncharacterized LOC106369565

uncharacterized LOC106413461

zinc finger protein GIS2-like

protein AIR2-like

uncharacterized LOC102620174

uncharacterized LOC102618947

uncharacterized LOC107823133

uncharacterized LOC107785007

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03013	Nucleocytoplasmic transport	3
zma03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	9
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	3
gma03040	Spliceosome	3
gma03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	3
gma03250	Viral life cycle - HIV-1	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	3
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	3
vvi03040	Spliceosome	2
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	12
ghi03022	Basal transcription factors	2
ghi03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00710	Carbon fixation by Calvin cycle	2
ghi01200	Carbon metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4
sot03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

100831383

123165953

123148924

123408827

4350762

100274278

103654520

8062651

100794448

100780476

101265444

101257334

103848033

103842474

100252970

100259916

7478597

7469918

112420400

112422218

107920667

107899200

106369565

106413461

102587480

102593191

102620174

102618947

107823133

107785007

66051992

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100831383 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100831383 (bdi-r.1 coexpression data)


Species	bdi	osa	zma	ath	gma	sly	vvi	ppo	mtr	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	2	3	2	3	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100831383 (bdi-r.1 coexpression data)

Top 50 enrichment test to 100831383 (bdi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**