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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103842474   uncharacterized LOC103842474 
 bra-r.6   103848033   protein AIR1 
 bna-r.1   106347704   protein AIR1-like 
 bna-r.1   106369565   uncharacterized LOC106369565 
 bna-r.1   106413461   uncharacterized LOC106413461 
 ath-u.5   AT3G43590   zinc knuckle (CCHC-type) family protein 
 ghi-r.1   107894219   cellular nucleic acid-binding protein homolog 
 ghi-r.1   107894978   zinc finger CCHC domain-containing protein 7 
 ghi-r.1   107920667   zinc finger CCHC domain-containing protein 7 
 cit-r.1   102618947   uncharacterized LOC102618947 
 cit-r.1   102620174   uncharacterized LOC102620174 
 gma-u.5   100780476   protein AIR1 
 gma-u.5   100794448   zinc finger CCHC domain-containing protein 7 
 vvi-u.5   100259916   uncharacterized LOC100259916 
 vvi-u.5   100252970   uncharacterized LOC100252970 
 ppo-u.5   7469918   cellular nucleic acid-binding protein homolog 
 ppo-u.5   7478597   uncharacterized LOC7478597 
 ppo-u.5   18098036   uncharacterized LOC18098036 
 mtr-u.5   112420400   zinc finger CCHC domain-containing protein 7 
 mtr-u.5   112422218   zinc finger CCHC domain-containing protein 7 
 sly-u.5   101257334   uncharacterized LOC101257334 
 sly-u.5   101259478   uncharacterized LOC101259478 
 sly-u.5   101265444   uncharacterized LOC101265444 
 sot-r.1   102584566   protein AIR1-like 
 sot-r.1   102587480   zinc finger protein GIS2-like 
 sot-r.1   102593191   protein AIR2-like 
 nta-r.1   107812026   uncharacterized LOC107812026 
 nta-r.1   107786809   uncharacterized LOC107786809 
 nta-r.1   107820934   uncharacterized LOC107820934 
 osa-u.5   4350762   uncharacterized LOC4350762 
 zma-u.5   103654520   zinc finger CCHC domain-containing protein 7-like 
 zma-u.5   100274278   zinc knuckle (CCHC-type) family protein 
 tae-r.2   123148924   zinc finger CCHC domain-containing protein 7 
 tae-r.2   123165953   zinc finger CCHC domain-containing protein 7 
 tae-r.2   123158188   zinc finger CCHC domain-containing protein 7 
 hvu-r.1   123408827   zinc finger CCHC domain-containing protein 7-like 
 sbi-r.1   8062651   protein AIR1 
 bdi-r.1   100831383   zinc finger CCHC domain-containing protein 7 
 cre-r.1   CHLRE_01g013800v5   uncharacterized protein 

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Top 50 coexpressed genes to 103842474 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103842474 (bra-r.6 coexpression data)

CoexMap"103842474"


braLOC103842474 | Entrez gene ID : 103842474    
Species bra bna ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 3 1 3 2 2 2 3 2 3 3 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (1500 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (5846 genes)  IEA  
Protein XP_009117346.1 [sequence] [blastp]
XP_033136699.1 [sequence] [blastp]
XP_033136700.1 [sequence] [blastp]
XP_033136701.1 [sequence] [blastp]
XP_033136702.1 [sequence] [blastp]
XP_033136704.1 [sequence] [blastp]
XP_033136705.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_009117346.1)
nucl 10  (predict for XP_033136699.1)
nucl 10  (predict for XP_033136700.1)
nucl 10  (predict for XP_033136701.1)
nucl 10  (predict for XP_033136702.1)
nucl 10  (predict for XP_033136704.1)
nucl 10  (predict for XP_033136705.1)
Subcellular
localization
TargetP
other 9  (predict for XP_009117346.1)
other 9  (predict for XP_033136699.1)
other 9  (predict for XP_033136700.1)
other 9  (predict for XP_033136701.1)
other 9  (predict for XP_033136702.1)
other 9  (predict for XP_033136704.1)
other 9  (predict for XP_033136705.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103842474
bra-r.6
for
103848033
bna-r.1
for
106347704
bna-r.1
for
106369565
bna-r.1
for
106413461
ath-u.5
for
AT3G43590
ghi-r.1
for
107894219
ghi-r.1
for
107894978
ghi-r.1
for
107920667
cit-r.1
for
102618947
cit-r.1
for
102620174
gma-u.5
for
100780476
gma-u.5
for
100794448
vvi-u.5
for
100259916
vvi-u.5
for
100252970
ppo-u.5
for
7469918
ppo-u.5
for
7478597
ppo-u.5
for
18098036
mtr-u.5
for
112420400
mtr-u.5
for
112422218
sly-u.5
for
101257334
sly-u.5
for
101259478
sly-u.5
for
101265444
sot-r.1
for
102584566
sot-r.1
for
102587480
sot-r.1
for
102593191
nta-r.1
for
107812026
nta-r.1
for
107786809
nta-r.1
for
107820934
osa-u.5
for
4350762
zma-u.5
for
103654520
zma-u.5
for
100274278
tae-r.2
for
123148924
tae-r.2
for
123165953
tae-r.2
for
123158188
hvu-r.1
for
123408827
sbi-r.1
for
8062651
bdi-r.1
for
100831383
cre-r.1
for
CHLRE_01g013800v5


Ortholog ID: 3346
Species bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC103842474 LOC103848033 LOC106347704 LOC106369565 LOC106413461 LOC107920667 LOC121225071 LOC107899200 LOC102618947 LOC102620174 LOC100780476 LOC100794448 LOC100259916 LOC100252970 LOC7469918 LOC7478597 LOC18098036 LOC112420400 LOC112422218 LOC101257334 LOC101259478 LOC101265444 LOC102584566 LOC102587480 LOC102593191 LOC107786809 LOC107823133 LOC107785007 LOC4350762 LOC103654520 LOC100274278 LOC123148924 LOC123165953 LOC123158188 LOC123408827 LOC8062651 LOC100831383 CHLRE_01g013800v5
Function* uncharacterized LOC103842474 protein AIR1 protein AIR1-like uncharacterized LOC106369565 uncharacterized LOC106413461 zinc finger CCHC domain-containing protein 7 zinc finger CCHC domain-containing protein 13-like cold shock protein 1 uncharacterized LOC102618947 uncharacterized LOC102620174 protein AIR1 zinc finger CCHC domain-containing protein 7 uncharacterized LOC100259916 uncharacterized LOC100252970 cellular nucleic acid-binding protein homolog uncharacterized LOC7478597 uncharacterized LOC18098036 zinc finger CCHC domain-containing protein 7 zinc finger CCHC domain-containing protein 7 uncharacterized LOC101257334 uncharacterized LOC101259478 uncharacterized LOC101265444 protein AIR1-like zinc finger protein GIS2-like protein AIR2-like uncharacterized LOC107786809 uncharacterized LOC107823133 uncharacterized LOC107785007 uncharacterized LOC4350762 zinc finger CCHC domain-containing protein 7-like zinc knuckle (CCHC-type) family protein zinc finger CCHC domain-containing protein 7 zinc finger CCHC domain-containing protein 7 zinc finger CCHC domain-containing protein 7 zinc finger CCHC domain-containing protein 7-like protein AIR1 zinc finger CCHC domain-containing protein 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 12
ghi03022 Basal transcription factors 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 3
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03250 Viral life cycle - HIV-1 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
gma03040 Spliceosome 3
gma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03040 Spliceosome 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 3
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
sot03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 3
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103842474 103848033 106347704 106369565 106413461 107920667 121225071 107899200 102618947 102620174 100780476 100794448 100259916 100252970 7469918 7478597 18098036 112420400 112422218 101257334 101259478 101265444 102584566 102587480 102593191 107786809 107823133 107785007 4350762 103654520 100274278 123148924 123165953 123158188 123408827 8062651 100831383 66051992
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