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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100835894   histidine--tRNA ligase, chloroplastic/mitochondrial 
 osa-u.5   4330767   histidine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100284312   histidyl-tRNA synthetase 
 ath-u.5   HRS1   Histidyl-tRNA synthetase 1 
 ath-u.5   AT5G03406   Class II aaRS and biotin synthetases superfamily protein 
 gma-u.5   100793186   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101267504   histidine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100256739   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18100157   histidine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25499324   histidine--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 100835894 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100835894 (bdi-r.1 coexpression data)

CoexMap"100835894"


bdiLOC100835894 | Entrez gene ID : 100835894      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi00970 [list] [network] Aminoacyl-tRNA biosynthesis (88 genes)
GO BP
GO:0006427 [list] [network] histidyl-tRNA aminoacylation  (2 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (4615 genes)  IEA  
GO MF
GO:0004821 [list] [network] histidine-tRNA ligase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_003578705.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 2  (predict for XP_003578705.1)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_003578705.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100835894
osa-u.5
for
4330767
zma-u.5
for
100284312
ath-u.5
for
HRS1
ath-u.5
for
AT5G03406
gma-u.5
for
100793186
sly-u.5
for
101267504
vvi-u.5
for
100256739
ppo-u.5
for
18100157
mtr-u.5
for
25499324


Ortholog ID: 8973
Species bdi tae tae hvu osa zma sbi sbi ath ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta
Symbol LOC100835894 LOC123122700 LOC123190888 LOC123428244 LOC4330767 LOC100284312 LOC110432547 LOC8078756 AT5G03406 HRS1 LOC100793186 LOC101267504 LOC103835191 LOC100256739 LOC18100157 LOC25499324 LOC107952913 LOC107894617 LOC106361555 LOC106389754 LOC102585772 LOC102617736 LOC107778161 LOC107804891
Function* histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidyl-tRNA synthetase histidine--tRNA ligase, chloroplastic/mitochondrial-like histidine--tRNA ligase, chloroplastic/mitochondrial Class II aaRS and biotin synthetases superfamily protein Histidyl-tRNA synthetase 1 histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa01240 Biosynthesis of cofactors 5
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00061 Fatty acid biosynthesis 2
sbi00780 Biotin metabolism 2
sbi01212 Fatty acid metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00970 Aminoacyl-tRNA biosynthesis 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo00900 Terpenoid backbone biosynthesis 2
ppo00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 8
bna01240 Biosynthesis of cofactors 8
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 6
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100835894 123122700 123190888 123428244 4330767 100284312 110432547 8078756 3770629 823753 100793186 101267504 103835191 100256739 18100157 25499324 107952913 107894617 106361555 106389754 102585772 102617736 107778161 107804891
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