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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106389754   histidine--tRNA ligase, chloroplastic/mitochondrial 
 bna-r.1   106361555   histidine--tRNA ligase, chloroplastic/mitochondrial 
 bra-r.6   103835191   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ath-u.5   HRS1   Histidyl-tRNA synthetase 1 
 ath-u.5   AT5G03406   Class II aaRS and biotin synthetases superfamily protein 
 ghi-r.1   107894617   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ghi-r.1   107952913   histidine--tRNA ligase, chloroplastic/mitochondrial 
 cit-r.1   102617736   histidine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100793186   histidine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100256739   histidine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   18100157   histidine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   25499324   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   101267504   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sot-r.1   102585772   histidine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107778161   histidine--tRNA ligase, chloroplastic/mitochondrial 
 nta-r.1   107804891   histidine--tRNA ligase, chloroplastic/mitochondrial-like 
 osa-u.5   4330767   histidine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100284312   histidyl-tRNA synthetase 
 tae-r.2   123190888   histidine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123122700   histidine--tRNA ligase, chloroplastic/mitochondrial 
 tae-r.2   123113175   histidine--tRNA ligase, chloroplastic/mitochondrial 
 hvu-r.1   123428244   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   8078756   histidine--tRNA ligase, chloroplastic/mitochondrial 
 sbi-r.1   110432547   histidine--tRNA ligase, chloroplastic/mitochondrial-like 
 bdi-r.1   100835894   histidine--tRNA ligase, chloroplastic/mitochondrial 

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Top 50 coexpressed genes to 106389754 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106389754 (bna-r.1 coexpression data)

CoexMap"106389754"


bnaLOC106389754 | Entrez gene ID : 106389754    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 2 2 1 1 1 1 1 1 1 2 1 1 3 1 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00970 [list] [network] Aminoacyl-tRNA biosynthesis (226 genes)
GO BP
GO:0006427 [list] [network] histidyl-tRNA aminoacylation  (7 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004821 [list] [network] histidine-tRNA ligase activity  (7 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013685551.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  chlo_mito 6,  mito 2  (predict for XP_013685551.1)
Subcellular
localization
TargetP
mito 7,  chlo 6  (predict for XP_013685551.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106389754
bna-r.1
for
106361555
bra-r.6
for
103835191
ath-u.5
for
HRS1
ath-u.5
for
AT5G03406
ghi-r.1
for
107894617
ghi-r.1
for
107952913
cit-r.1
for
102617736
gma-u.5
for
100793186
vvi-u.5
for
100256739
ppo-u.5
for
18100157
mtr-u.5
for
25499324
sly-u.5
for
101267504
sot-r.1
for
102585772
nta-r.1
for
107778161
nta-r.1
for
107804891
osa-u.5
for
4330767
zma-u.5
for
100284312
tae-r.2
for
123190888
tae-r.2
for
123122700
tae-r.2
for
123113175
hvu-r.1
for
123428244
sbi-r.1
for
8078756
sbi-r.1
for
110432547
bdi-r.1
for
100835894


Ortholog ID: 8973
Species bna bna bra ath ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi
Symbol LOC106389754 LOC106361555 LOC103835191 HRS1 AT5G03406 LOC107894617 LOC107952913 LOC102617736 LOC100793186 LOC100256739 LOC18100157 LOC25499324 LOC101267504 LOC102585772 LOC107778161 LOC107804891 LOC4330767 LOC100284312 LOC123190888 LOC123122700 LOC123104888 LOC123428244 LOC8078756 LOC110432547 LOC100835894
Function* histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial Histidyl-tRNA synthetase 1 Class II aaRS and biotin synthetases superfamily protein histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial-like histidine--tRNA ligase, chloroplastic/mitochondrial histidyl-tRNA synthetase histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial histidine--tRNA ligase, chloroplastic/mitochondrial-like histidine--tRNA ligase, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 8
bna01240 Biosynthesis of cofactors 8
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 4
bna01240 Biosynthesis of cofactors 4
bna00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 2
bra00970 Aminoacyl-tRNA biosynthesis 2
bra00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 7
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 4
ppo00900 Terpenoid backbone biosynthesis 2
ppo00340 Histidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
sly01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 6
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta00450 Selenocompound metabolism 2
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 5
osa01240 Biosynthesis of cofactors 5
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 4
zma00270 Cysteine and methionine metabolism 2
zma01200 Carbon metabolism 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 12
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 5
hvu00970 Aminoacyl-tRNA biosynthesis 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 4
sbi00061 Fatty acid biosynthesis 2
sbi00780 Biotin metabolism 2
sbi01212 Fatty acid metabolism 2
sbi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 9
bdi00970 Aminoacyl-tRNA biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106389754 106361555 103835191 823753 3770629 107894617 107952913 102617736 100793186 100256739 18100157 25499324 101267504 102585772 107778161 107804891 4330767 100284312 123190888 123122700 123104888 123428244 8078756 110432547 100835894
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