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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100836649   DExH-box ATP-dependent RNA helicase DExH11 
 osa-u.5   4328375   DExH-box ATP-dependent RNA helicase DExH11 
 zma-u.5   100383871   uncharacterized LOC100383871 
 ath-u.5   AT3G46960   RNA helicase, ATP-dependent, SK12/DOB1 protein 
 gma-u.5   100788432   DExH-box ATP-dependent RNA helicase DExH11 
 sly-u.5   101264125   DExH-box ATP-dependent RNA helicase DExH11 
 vvi-u.5   100253599   DExH-box ATP-dependent RNA helicase DExH11 
 ppo-u.5   7468590   DExH-box ATP-dependent RNA helicase DExH11 
 mtr-u.5   25490766   DExH-box ATP-dependent RNA helicase DExH11 

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Top 50 coexpressed genes to 100836649 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100836649 (bdi-r.1 coexpression data)

CoexMap"100836649"


bdiLOC100836649 | Entrez gene ID : 100836649      
Species bdi osa zma ath gma sly vvi ppo mtr hvu bra cit bna sbi ghi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03018 [list] [network] RNA degradation (115 genes)
GO BP
GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay  (2 genes)  IEA  
GO CC
GO:0055087 [list] [network] Ski complex  (3 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (56 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1239 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (1995 genes)  IEA  
Protein XP_003570958.2 [sequence] [blastp]
XP_024317102.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for XP_003570958.2)
cyto 5,  nucl 4,  chlo 1  (predict for XP_024317102.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003570958.2)
other 7,  scret 3  (predict for XP_024317102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100836649
osa-u.5
for
4328375
zma-u.5
for
100383871
ath-u.5
for
AT3G46960
gma-u.5
for
100788432
sly-u.5
for
101264125
vvi-u.5
for
100253599
ppo-u.5
for
7468590
mtr-u.5
for
25490766


Ortholog ID: 11331
Species bdi tae tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100836649 LOC123136414 LOC123132362 LOC123404187 LOC4328375 LOC100383871 LOC8076091 AT3G46960 LOC100788432 LOC101264125 LOC103873280 LOC100253599 LOC7468590 LOC25490766 LOC121215524 LOC107950212 LOC106347561 LOC106352753 LOC102593100 LOC102630388 LOC107804228 LOC107829143 CHLRE_11g482483v5
Function* DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 uncharacterized LOC100383871 DExH-box ATP-dependent RNA helicase DExH11 RNA helicase, ATP-dependent, SK12/DOB1 protein DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11-like ATP-dependent RNA helicase SKI2 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 3
nta03018 RNA degradation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 3
nta03018 RNA degradation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100836649 123136414 123132362 123404187 4328375 100383871 8076091 823849 100788432 101264125 103873280 100253599 7468590 25490766 121215524 107950212 106347561 106352753 102593100 102630388 107804228 107829143 66055372
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