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Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107804228   DExH-box ATP-dependent RNA helicase DExH11 
 nta-r.1   107829143   DExH-box ATP-dependent RNA helicase DExH11 
 sly-u.5   101264125   DExH-box ATP-dependent RNA helicase DExH11 
 sot-r.1   102593100   ATP-dependent RNA helicase SKI2 
 ath-u.5   AT3G46960   RNA helicase, ATP-dependent, SK12/DOB1 protein 
 gma-u.5   100788432   DExH-box ATP-dependent RNA helicase DExH11 
 bra-r.6   103873280   DExH-box ATP-dependent RNA helicase DExH11 
 vvi-u.5   100253599   DExH-box ATP-dependent RNA helicase DExH11 
 ppo-u.5   7468590   DExH-box ATP-dependent RNA helicase DExH11 
 mtr-u.5   25490766   DExH-box ATP-dependent RNA helicase DExH11 
 ghi-r.1   107950212   DExH-box ATP-dependent RNA helicase DExH11 
 ghi-r.1   121215524   DExH-box ATP-dependent RNA helicase DExH11 
 bna-r.1   106347561   DExH-box ATP-dependent RNA helicase DExH11 
 bna-r.1   106352753   DExH-box ATP-dependent RNA helicase DExH11-like 
 cit-r.1   102630388   DExH-box ATP-dependent RNA helicase DExH11 
 osa-u.5   4328375   DExH-box ATP-dependent RNA helicase DExH11 
 zma-u.5   100383871   uncharacterized LOC100383871 
 tae-r.2   123136414   DExH-box ATP-dependent RNA helicase DExH11 
 tae-r.2   123132362   DExH-box ATP-dependent RNA helicase DExH11 
 hvu-r.1   123404187   DExH-box ATP-dependent RNA helicase DExH11 
 sbi-r.1   8076091   DExH-box ATP-dependent RNA helicase DExH11 
 bdi-r.1   100836649   DExH-box ATP-dependent RNA helicase DExH11 
 cre-r.1   CHLRE_11g482483v5   uncharacterized protein 

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Top 50 coexpressed genes to 107804228 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107804228 (nta-r.1 coexpression data)

CoexMap"107804228"


ntaLOC107804228 | Entrez gene ID : 107804228      
Species nta sly sot ath gma bra vvi ppo mtr ghi bna cit osa zma tae hvu sbi bdi cre
Paralog 2 1 1 1 1 1 1 1 1 2 2 1 1 1 2 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG nta03018 [list] [network] RNA degradation (211 genes)
GO BP
GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay  (4 genes)  IEA  
GO CC
GO:0055087 [list] [network] Ski complex  (5 genes)  IEA  
GO MF
GO:0003724 [list] [network] RNA helicase activity  (126 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3859 genes)  IEA  
Protein XP_075105325.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  chlo 2,  nucl 2  (predict for XP_075105325.1)
Subcellular
localization
TargetP
other 7  (predict for XP_075105325.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107804228
nta-r.1
for
107829143
sly-u.5
for
101264125
sot-r.1
for
102593100
ath-u.5
for
AT3G46960
gma-u.5
for
100788432
bra-r.6
for
103873280
vvi-u.5
for
100253599
ppo-u.5
for
7468590
mtr-u.5
for
25490766
ghi-r.1
for
107950212
ghi-r.1
for
121215524
bna-r.1
for
106347561
bna-r.1
for
106352753
cit-r.1
for
102630388
osa-u.5
for
4328375
zma-u.5
for
100383871
tae-r.2
for
123136414
tae-r.2
for
123132362
hvu-r.1
for
123404187
sbi-r.1
for
8076091
bdi-r.1
for
100836649
cre-r.1
for
CHLRE_11g482483v5


Ortholog ID: 11331
Species nta nta sly sot ath gma bra vvi ppo mtr ghi ghi bna bna cit osa zma tae tae hvu sbi bdi cre
Symbol LOC107804228 LOC107829143 LOC101264125 LOC102593100 AT3G46960 LOC100788432 LOC103873280 LOC100253599 LOC7468590 LOC25490766 LOC107950212 LOC121215524 LOC106347561 LOC106352753 LOC102630388 LOC4328375 LOC100383871 LOC123136414 LOC123132362 LOC123404187 LOC8076091 LOC100836649 CHLRE_11g482483v5
Function* DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 ATP-dependent RNA helicase SKI2 RNA helicase, ATP-dependent, SK12/DOB1 protein DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11-like DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 uncharacterized LOC100383871 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 DExH-box ATP-dependent RNA helicase DExH11 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 3
nta03018 RNA degradation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04148 Efferocytosis 3
nta03018 RNA degradation 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03082 ATP-dependent chromatin remodeling 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03082 ATP-dependent chromatin remodeling 3
ghi03018 RNA degradation 2
ghi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03013 Nucleocytoplasmic transport 2
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 4
zma03015 mRNA surveillance pathway 2
zma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107804228 107829143 101264125 102593100 823849 100788432 103873280 100253599 7468590 25490766 107950212 121215524 106347561 106352753 102630388 4328375 100383871 123136414 123132362 123404187 8076091 100836649 66055372
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