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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100838165   polycomb group protein FIE2 
 bdi-r.1   100828611   polycomb group protein FIE2 
 tae-r.2   123167651   polycomb group protein FIE1 
 tae-r.2   123156985   polycomb group protein FIE1 
 hvu-r.1   123409904   polycomb group protein FIE1 
 osa-u.5   4344620   polycomb group protein FIE1-like 
 zma-u.5   542075   fertilization independent endosperm 1 
 zma-u.5   542076   fertilization independent endosperm 2 
 sbi-r.1   8067799   polycomb group protein FIE2 
 ath-u.5   FIE   Transducin/WD40 repeat-like superfamily protein 
 gma-u.5   100127417   FIE 
 gma-u.5   100795288   polycomb group protein FIE1 
 sly-u.5   FIE   fertilization-independent endosperm protein 
 bra-r.6   103835815   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM 
 bra-r.6   103869280   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM 
 vvi-u.5   100246903   polycomb group protein FIE1 
 ppo-u.5   18095896   polycomb group protein FIE1 
 mtr-u.5   25482354   polycomb group protein FIE1 
 ghi-r.1   107920781   polycomb group protein FIE1 
 ghi-r.1   107895196   polycomb group protein FIE1 
 bna-r.1   106365963   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like 
 bna-r.1   106383006   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM 
 bna-r.1   106433782   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM 
 sot-r.1   102577673   fertilization-independent endosperm protein 
 cit-r.1   102631462   polycomb group protein FIE1 
 nta-r.1   107766652   polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like 
 nta-r.1   107794471   polycomb group protein FIE1 
 cre-r.1   CHLRE_16g693750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100838165 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100838165 (bdi-r.1 coexpression data)

CoexMap"100838165"


bdiLOC100838165 | Entrez gene ID : 100838165    
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 2 2 1 1 2 1 1 2 1 2 1 1 1 2 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03083 [list] [network] Polycomb repressive complex (64 genes)
GO BP
GO:0000122 [list] [network] negative regulation of transcription by RNA polymerase II  (21 genes)  IEA  
GO CC
GO:0035098 [list] [network] ESC/E(Z) complex  (11 genes)  IEA  
GO MF
GO:0031491 [list] [network] nucleosome binding  (27 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4040 genes)  IEA  
Protein XP_010230658.1 [sequence] [blastp]
XP_024315465.1 [sequence] [blastp]
XP_024315466.1 [sequence] [blastp]
XP_024315467.1 [sequence] [blastp]
XP_024315468.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  pero 4  (predict for XP_010230658.1)
cyto 5,  pero 4  (predict for XP_024315465.1)
cyto 5,  pero 4  (predict for XP_024315466.1)
cyto 5,  pero 4  (predict for XP_024315467.1)
cyto 5,  pero 4  (predict for XP_024315468.1)
Subcellular
localization
TargetP
mito 4,  other 3,  chlo 3  (predict for XP_010230658.1)
mito 4,  other 3,  chlo 3  (predict for XP_024315465.1)
mito 4,  other 3,  chlo 3  (predict for XP_024315466.1)
mito 4,  other 3,  chlo 3  (predict for XP_024315467.1)
mito 4,  other 3  (predict for XP_024315468.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100838165
bdi-r.1
for
100828611
tae-r.2
for
123167651
tae-r.2
for
123156985
hvu-r.1
for
123409904
osa-u.5
for
4344620
zma-u.5
for
542075
zma-u.5
for
542076
sbi-r.1
for
8067799
ath-u.5
for
FIE
gma-u.5
for
100127417
gma-u.5
for
100795288
sly-u.5
for
FIE
bra-r.6
for
103835815
bra-r.6
for
103869280
vvi-u.5
for
100246903
ppo-u.5
for
18095896
mtr-u.5
for
25482354
ghi-r.1
for
107920781
ghi-r.1
for
107895196
bna-r.1
for
106365963
bna-r.1
for
106383006
bna-r.1
for
106433782
sot-r.1
for
102577673
cit-r.1
for
102631462
nta-r.1
for
107766652
nta-r.1
for
107794471
cre-r.1
for
CHLRE_16g693750v5


Ortholog ID: 4082
Species bdi bdi tae hvu osa zma zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100838165 LOC100828611 LOC123167651 LOC123409904 LOC4344620 LOC542075 LOC542076 LOC8067799 FIE LOC100127417 LOC100795288 FIE LOC103869280 LOC100246903 LOC18095896 LOC25482354 LOC107920781 LOC107895196 LOC106365963 LOC106453896 LOC102577673 LOC102631462 LOC107766652 LOC107794471 CHLRE_16g693750v5
Function* polycomb group protein FIE2 polycomb group protein FIE2 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1-like fertilization independent endosperm 1 fertilization independent endosperm 2 polycomb group protein FIE2 Transducin/WD40 repeat-like superfamily protein FIE polycomb group protein FIE1 fertilization-independent endosperm protein polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like fertilization-independent endosperm protein polycomb group protein FIE1 polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM-like polycomb group protein FIE1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 5
tae03018 RNA degradation 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00380 Tryptophan metabolism 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
zma03013 Nucleocytoplasmic transport 2
zma03083 Polycomb repressive complex 2
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 2
ath03082 ATP-dependent chromatin remodeling 2
ath03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 3
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 2
ghi03013 Nucleocytoplasmic transport 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 4
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00460 Cyanoamino acid metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta00670 One carbon pool by folate 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100838165 100828611 123167651 123409904 4344620 542075 542076 8067799 821622 100127417 100795288 100136877 103869280 100246903 18095896 25482354 107920781 107895196 106365963 106453896 102577673 102631462 107766652 107794471 66056835
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